Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2188 |
Symbol | |
ID | 5747750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 2401180 |
End bp | 2402769 |
Gene Length | 1590 bp |
Protein Length | 529 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641297271 |
Product | poly(A) polymerase |
Protein accession | YP_001563213 |
Protein GI | 160897631 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
TIGRFAM ID | [TIGR01942] poly(A) polymerase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.891467 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.883009 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAGA ACATCATCGA CAAGCTGCTG GGCAAGACCT CGGCTGCCCC CCGCGCCCGC AAGTCCCCCT TCGGCAAGCG CCAGGAAGTG CCCGTGCAGG TGCACGGCAT CGACCCCAAC CTGGTGGACC GGCGTGCCAT CGACGTGGTC GAGACGCTGC AGGACGCCGG CTACGAGGCC TACATCGTCG GCGGCGCCGT GCGCGACCTG CTGCTGGGCC TGCGCCCCAA GGACTTCGAC GTGGCCACCA ATGCCACGCC CGAGCAGGTC AAGGGCCTGT TCCGCCGCGC CTTCATCATC GGCAAGCGCT TTCGCATCGT GCACGTGGTC TATGGCCGCG GGCGCGAGAA CGAGGTCATC GAAGTCTCCA CCTTCCGCGC CTTCCTGGAC AACAGCGCGG CCGAGGCCGT GAGCGGCAAC GAGCGCACCA GCAAGGCCCA GCTCGCCGGC ATGCACCATG CGGTGGACGC CAGCGGCCGC GTGCTGCGCG ACAACGTCTG GGGCCCGCAG GACCAGGACG CCACGCGCCG CGACTTCACC ATCAACGCCA TGTACTACGA CCCGCGCACG CAGATCGTGG TGGACTATCA CAAGGGCATC GACGACGCCA AGAAGCGCAT GCTGCGCATG ATCGGCGACC CGGCCACGCG CTACCGCGAA GACCCGGTGC GCATCATCCG CGCCGTGCGC TTCGCGGCCA AGCTGGCGGG CAAGGGCTTC AAGATCGAGC CCAAGACCGC CAAGCCCCTG GTGGAGTGCG AGCCGCTGCT GGCCGATGTG CCGCAAAGCC GCCTGTTCGA TGAAATGCTC AAGCTGCTGC AGACCGGCCA CGCGCTGGCC TCGGTGGAGC AGTTGCGCGG CCTGGGCCTG GCACGCGGCA TCTACTCGCT GCTGGATGTG GTGGTCGAGC GCGCGGAGCA GCCCTTTGTG CGCGCCGCGC TGACCGACAC CGACCGCCGT GTCGAGGAAG GCAAGCCCGT GGCGCCCAGC TTCCTGCTGG CCTGCGTGCT GTGGCATGAC GTCAAGACCG GCTGGGAACG CCGCCTGAAC CAGCGCCAGC ACCCCTTCCC CGCGCTGCAG GAATCCATCG ACGAAGTGTT CGACCAGCGC ATCGGCGATG TCTCGGGCCG CGGCAAGCTG GCCGCCGACA TGCGCGAGAT CTGGGTCATG CAGCCGCGCT TTGACAAGCG CACGGGCGCC ACGCCGTTCA GCCTGGTGGC CCAGCCGCGC TTTCGCGCGG GCTTCGACTT CATGCGCCTG CGCGCCGACA TCGGCGAGGT CGATGAAAGC CTGGCCAGCT GGTGGCAGGA GTTCCAGAAC GCCGACGACG CGCGCCGCGA CGACCTGATC GCCCAGGCCC GCGACGAGCA GCGCGCCCGC CAGCGCAGCG CCGAGCCCAA GGTGCACCGC GTGGCCAAGG CCCGCCCTGC GCGCGAGGAC GCCGGCGCTG GCGAAGCGCA GCAGGCCGAC GCACCTGCCG CCGCCTTGCC CCAGGTGGAG GGTGAGGAAG GGTCAGCGCC CAAGAAGCGC CGCCGCCGTC GCCGCAAGCC CCAGGGCGGT GGTGATGGCG CCGTGGGCGG GGATGACTGA
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Protein sequence | MIKNIIDKLL GKTSAAPRAR KSPFGKRQEV PVQVHGIDPN LVDRRAIDVV ETLQDAGYEA YIVGGAVRDL LLGLRPKDFD VATNATPEQV KGLFRRAFII GKRFRIVHVV YGRGRENEVI EVSTFRAFLD NSAAEAVSGN ERTSKAQLAG MHHAVDASGR VLRDNVWGPQ DQDATRRDFT INAMYYDPRT QIVVDYHKGI DDAKKRMLRM IGDPATRYRE DPVRIIRAVR FAAKLAGKGF KIEPKTAKPL VECEPLLADV PQSRLFDEML KLLQTGHALA SVEQLRGLGL ARGIYSLLDV VVERAEQPFV RAALTDTDRR VEEGKPVAPS FLLACVLWHD VKTGWERRLN QRQHPFPALQ ESIDEVFDQR IGDVSGRGKL AADMREIWVM QPRFDKRTGA TPFSLVAQPR FRAGFDFMRL RADIGEVDES LASWWQEFQN ADDARRDDLI AQARDEQRAR QRSAEPKVHR VAKARPARED AGAGEAQQAD APAAALPQVE GEEGSAPKKR RRRRRKPQGG GDGAVGGDD
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