Gene Daci_2122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2122 
Symbol 
ID5747684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2329887 
End bp2330276 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content66% 
IMG OID641297205 
ProductDoxX family protein 
Protein accessionYP_001563147 
Protein GI160897565 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0269415 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTCT GGAGCCACTT TCACCATCCC CAGGCAGCCA TGGTGCTGCT GCGCGTCACG 
CTCGCGGTCC TGTTGCTTTT TCACGGCTGG GCCAAGCTGC GCTACGGCAT AGGCAGCATC
GAGCGCATGG TGGAGTCTGC GGGCGCGCCG GGCTGGCTGG CCTATGCGGT CTATCTGGGT
GAGGTGGTGG CGCCGCTGCT GCTGCTGGTG GGCCTGTGGG TGGTGCCTGC GGCGCTGGTG
ATTGCGATCA ACATGGTCGT GGCCTTTGCG CTGGTGCACA CCGGCCAGGT GATGCAGCTG
CACAGCTCGG GAGGCTGGGC GCTGGAGCTG CAGGCCTTCT TCTTCATCAC GGCGCTGGTC
GTGGCCATGG GGCACGCCAA GGGCAAGTAG
 
Protein sequence
MKFWSHFHHP QAAMVLLRVT LAVLLLFHGW AKLRYGIGSI ERMVESAGAP GWLAYAVYLG 
EVVAPLLLLV GLWVVPAALV IAINMVVAFA LVHTGQVMQL HSSGGWALEL QAFFFITALV
VAMGHAKGK