Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1933 |
Symbol | |
ID | 5747491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 2126025 |
End bp | 2126996 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641297012 |
Product | hypothetical protein |
Protein accession | YP_001562958 |
Protein GI | 160897376 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0305] Replicative DNA helicase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.262327 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.000000452368 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAAACG TATTCATGCC TGACGACATC GATTTCGCTG CATACGAGCA CGAGACCGAC GCGCAGCAAA AGGTGCTCCC GGCATCGTCC TGGGTGCAGG AGTTGATCGA CCGGATTCGC AACCCGATCC GCGCAAAGCA GGCGTTCATG CCGTGGCGCA AGACGGCCCA GCTGGTGCAG TTCCGCCCGG GTGAGGTGAC GCTGTGGGGT GGCGCGAACG GCAATGGCAA GTCCCTGGTG ACCGGGCAAG TAGCGCTGTC GCTGTGCGGT CAAGGCGAGC GCGTGGCAAT CGCCAGCTTT GAGATGAAGC CCATCAAGAC GCTGGAGCGC ATGGGCCGGC AGTGGTCCGG CACGAACCCC GCGCATCCGG CCTATGCAGG CAACGACGAC GGCCAACGCA TCCTGATCGA CACATACGAG CAATTCCGCG ACTGGACCGA CAACAAGCTG TGGCTGTACG ACCAGCAGGG CACCGTGACT ACCGCCCAGG TCTGCGCCGT GGTCCGCTAC GCCGCGGTTG AGCTCAAGGT CACTCACTTC GTCGTGGACA GCCTGATGAA GTGCGTGCAG GGCGAGGACG ACTACAACGG CCAGAAGCTC TTTGTTGACG AGCTCACTGC CATTGCCCGC GACCACGGCA TCCACATCCA TCTGATCCAC CACATCAAGA AGCCTGCCAG CGAGGACCAC AAGCCCAACA AGTACGACAT GAAGGGCTCG GGCGCCATTA CCGACCAGGT GGACAACGTG ATCGCCGTGT GGCGCAACAA GCCCAAGGAG CGCAAGCGCG ATGAGGGCCT GCTGACCGAG GAAGCCGACG TGAAAGAGCC CGACTGCCTG CTCATCTGCG ACAAGCAACG GAACGGCGAG TGGGAGGGCT CCATCGGCCT CTGGTTCGAG CGCGACAGCC AGCAATTCGT CGCATCCCAT GGGGAGGAAC CCCTTGTCCT CTACACACCG GAGGTCGCAT GA
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Protein sequence | MANVFMPDDI DFAAYEHETD AQQKVLPASS WVQELIDRIR NPIRAKQAFM PWRKTAQLVQ FRPGEVTLWG GANGNGKSLV TGQVALSLCG QGERVAIASF EMKPIKTLER MGRQWSGTNP AHPAYAGNDD GQRILIDTYE QFRDWTDNKL WLYDQQGTVT TAQVCAVVRY AAVELKVTHF VVDSLMKCVQ GEDDYNGQKL FVDELTAIAR DHGIHIHLIH HIKKPASEDH KPNKYDMKGS GAITDQVDNV IAVWRNKPKE RKRDEGLLTE EADVKEPDCL LICDKQRNGE WEGSIGLWFE RDSQQFVASH GEEPLVLYTP EVA
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