Gene Daci_1933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1933 
Symbol 
ID5747491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2126025 
End bp2126996 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content62% 
IMG OID641297012 
Producthypothetical protein 
Protein accessionYP_001562958 
Protein GI160897376 
COG category[L] Replication, recombination and repair 
COG ID[COG0305] Replicative DNA helicase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.262327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000452368 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAAACG TATTCATGCC TGACGACATC GATTTCGCTG CATACGAGCA CGAGACCGAC 
GCGCAGCAAA AGGTGCTCCC GGCATCGTCC TGGGTGCAGG AGTTGATCGA CCGGATTCGC
AACCCGATCC GCGCAAAGCA GGCGTTCATG CCGTGGCGCA AGACGGCCCA GCTGGTGCAG
TTCCGCCCGG GTGAGGTGAC GCTGTGGGGT GGCGCGAACG GCAATGGCAA GTCCCTGGTG
ACCGGGCAAG TAGCGCTGTC GCTGTGCGGT CAAGGCGAGC GCGTGGCAAT CGCCAGCTTT
GAGATGAAGC CCATCAAGAC GCTGGAGCGC ATGGGCCGGC AGTGGTCCGG CACGAACCCC
GCGCATCCGG CCTATGCAGG CAACGACGAC GGCCAACGCA TCCTGATCGA CACATACGAG
CAATTCCGCG ACTGGACCGA CAACAAGCTG TGGCTGTACG ACCAGCAGGG CACCGTGACT
ACCGCCCAGG TCTGCGCCGT GGTCCGCTAC GCCGCGGTTG AGCTCAAGGT CACTCACTTC
GTCGTGGACA GCCTGATGAA GTGCGTGCAG GGCGAGGACG ACTACAACGG CCAGAAGCTC
TTTGTTGACG AGCTCACTGC CATTGCCCGC GACCACGGCA TCCACATCCA TCTGATCCAC
CACATCAAGA AGCCTGCCAG CGAGGACCAC AAGCCCAACA AGTACGACAT GAAGGGCTCG
GGCGCCATTA CCGACCAGGT GGACAACGTG ATCGCCGTGT GGCGCAACAA GCCCAAGGAG
CGCAAGCGCG ATGAGGGCCT GCTGACCGAG GAAGCCGACG TGAAAGAGCC CGACTGCCTG
CTCATCTGCG ACAAGCAACG GAACGGCGAG TGGGAGGGCT CCATCGGCCT CTGGTTCGAG
CGCGACAGCC AGCAATTCGT CGCATCCCAT GGGGAGGAAC CCCTTGTCCT CTACACACCG
GAGGTCGCAT GA
 
Protein sequence
MANVFMPDDI DFAAYEHETD AQQKVLPASS WVQELIDRIR NPIRAKQAFM PWRKTAQLVQ 
FRPGEVTLWG GANGNGKSLV TGQVALSLCG QGERVAIASF EMKPIKTLER MGRQWSGTNP
AHPAYAGNDD GQRILIDTYE QFRDWTDNKL WLYDQQGTVT TAQVCAVVRY AAVELKVTHF
VVDSLMKCVQ GEDDYNGQKL FVDELTAIAR DHGIHIHLIH HIKKPASEDH KPNKYDMKGS
GAITDQVDNV IAVWRNKPKE RKRDEGLLTE EADVKEPDCL LICDKQRNGE WEGSIGLWFE
RDSQQFVASH GEEPLVLYTP EVA