Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1909 |
Symbol | |
ID | 5747467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 2110953 |
End bp | 2111954 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641296988 |
Product | integrase family protein |
Protein accession | YP_001562934 |
Protein GI | 160897352 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.838759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00000212902 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCGATCG TCCGTGATAA ATCGCGTGGT ACGTACGTCT TTGAATTTGA CCGCATCGTC AACGGCGGGC GTATCCGCAT ACGAAAGCGC CTTCCTAAAG CTTGGACTTC GGCTCAAGCC GACGAGTTCG AGCGCAAAGA GTCAGCGCGG ATCTACGCGG CCGCGAATGG CGTTGGTTCA GAGGACAGAC TGATCACTGA CGCCATCGCT CTCTACGTCG CTGAGAGGGC GCCACTATTA AAACAGGGGA AGAATGCCGC ACGCGAGATC CATCAGATCC ACTGGGCATT CAATGGAAAG CCCATCAGTG CCTTAGCTGA AGTGTGCCGC GCCGTGGTCC AGAAGTCTGG CAAGTCACGG TACGGCAAAG AAATGGCACC GGCCACGATC CGGGCGCGCA TCCGCTATTT GGTGGCAGCG TGCCGCTACG CATGGAAGTA CCATGGGTTC GGCACTGCCG ACCCTGGCGC CCGGGTGATC ACGCCCCAGG TGCGCAACGA ACGGCGGGTC TACATCGACC GCCGCGAGAT GCTCAAGATC GCGCGCAAAA TCAGAAACCG CAAGGTGCGG CGCGTAATCC GCATAGCGTT CTACAGCGGG ATGCGACTGG GGGAGATCCT ATCCGCCCGG GTGGAGGGTG GTCGGTGGCA CTTGGACGAT ACGAAGAACG GGGAGCCGCG CATCGTCCCA ATTCACCCCC GAGTCTGGAC GGCAGCGCAC AACACGTCGC GCAAGCCTGC AAAGATCACA GTGCAGTCGT ACTTCAGGGA AGCCGCCCGG GCATTGGGAC ACAATGATCT GCACTTCCAC GATCTGCGGC ACTCCGCGGC GTCGGAGATG ATCAACAACG ACATCGACCT CTACACGGTC GGCGCGGTGC TAGGGCATAA GGATCAGCGC AGCAGTGCGC GCTATGCCCA CCTAGCGGTA AAACGACTCG ACTTGGCCAT CAAAAAGATA GGGCAAAAAA CCCCCACCAC AGAGCGCAAA AAAGCCGCTT GA
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Protein sequence | MPIVRDKSRG TYVFEFDRIV NGGRIRIRKR LPKAWTSAQA DEFERKESAR IYAAANGVGS EDRLITDAIA LYVAERAPLL KQGKNAAREI HQIHWAFNGK PISALAEVCR AVVQKSGKSR YGKEMAPATI RARIRYLVAA CRYAWKYHGF GTADPGARVI TPQVRNERRV YIDRREMLKI ARKIRNRKVR RVIRIAFYSG MRLGEILSAR VEGGRWHLDD TKNGEPRIVP IHPRVWTAAH NTSRKPAKIT VQSYFREAAR ALGHNDLHFH DLRHSAASEM INNDIDLYTV GAVLGHKDQR SSARYAHLAV KRLDLAIKKI GQKTPTTERK KAA
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