Gene Daci_1889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1889 
Symbol 
ID5747446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2091235 
End bp2091822 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content70% 
IMG OID641296967 
ProductTetR family transcriptional regulator 
Protein accessionYP_001562914 
Protein GI160897332 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGC AAGTCCCATC CCTTTCCAAA ACAGGCGGTC CCGCCCGTCC CGGCGGACGC 
AGCGCGCGCA TCCAGGCCAC GGTCTACCAG ACCGTCAAGG GCCTGTTGGA AACCATGCCG
CGCGAGGAAT TGAGCTTTCC GCTCATCGCC GCCCAGGCGG GCGTGACGCC GTCCACCCTC
TACCGGCGCT GGGGCGACAT ACAGCAGTTG CTGGCCGATG TGGCCGTGGA AATCATCCGG
CCCACGGCGC CGCCGCTGGA CACGGGCACG CTGGAGGGCG ACCTGCTGGC CTGGGCCGAG
CAGTTCCTGG AGGAGTCGGC CTCGCCGCTG GGACGCACCA TGCTGCGCGA CATGGCCGCC
GCAGCAGGCA ACGAGCACAC GCCCTGCGCC TGCGTGGAAA TCCTGCGCGG GCAACTGGCG
CAGATCGGCG AGCGCGCAGC GCGGCGTGGC GAGGCGATGC CCGCTGCGGA CACCCTGATC
GACGCGCTGG CCGCGCCCAT CGTCTACCGC GTGCTGTTCG ATCTGCCGCC GTCCCTGGAA
CACGTGCAGG CACGGGTGCG GGGCCTGCTG CAGGCTGAAA CGGCCTAG
 
Protein sequence
MSTQVPSLSK TGGPARPGGR SARIQATVYQ TVKGLLETMP REELSFPLIA AQAGVTPSTL 
YRRWGDIQQL LADVAVEIIR PTAPPLDTGT LEGDLLAWAE QFLEESASPL GRTMLRDMAA
AAGNEHTPCA CVEILRGQLA QIGERAARRG EAMPAADTLI DALAAPIVYR VLFDLPPSLE
HVQARVRGLL QAETA