Gene Daci_1794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1794 
Symbol 
ID5747352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1992928 
End bp1993557 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content70% 
IMG OID641296874 
ProductMarR family transcriptional regulator 
Protein accessionYP_001562821 
Protein GI160897239 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.3228 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGATAT GTCAACATTG GTGGATCATG CGGCCATCGC AATCGCCGTC GCCGCCCGGT 
TTCCTCCGCC CAATGCCCCG CCCACGCACA TCCACGATCC CTGCCGCCGA TGCCGCCACC
GGCCCTGCAC CGGACACGCA GGTCTGCAGC CAGACGCTGG CGCTGGAGGA CTTCATCACC
TTCCGCCTGG GCGCGCTGTC CAATGCGCTG CAGACCCAGG TGACGCGCCA CTACATCGCG
CCAGCATCGC CCGTGGGGCT GACCGAGTGG CGGCTCATGG GCCAGATCCA GCGCCATGGT
GAACTGCACG CCAGCGCGCT GTCGCGCCTG AGCCTGATGG ACAAGGCCCA GATCAGCCGC
GCGCTGCAGC CGCTGATCGA CCGGGGCTGG GTGCTGCGCC GCGCCGATCC GCAGCACGCG
CGGCGCCACC TGCTGCAGCT GAGCGAAGCA GGGCAGGCGC TCTTCGACGA GGTGCTGTCC
CGCGCACGCC CCTACCAGGC GGCCCTGCTC AATGCCCTGA CGGCCGATGA GCGCGCCATG
CTGGACCGCA TCCTGGACAA GCTGGGCCGT GCCTCCCAAG CGCTGGACCA GGGGCTGGAC
CAGGGGCTGG ACCAGGGGCT GGATGCCTGA
 
Protein sequence
MLICQHWWIM RPSQSPSPPG FLRPMPRPRT STIPAADAAT GPAPDTQVCS QTLALEDFIT 
FRLGALSNAL QTQVTRHYIA PASPVGLTEW RLMGQIQRHG ELHASALSRL SLMDKAQISR
ALQPLIDRGW VLRRADPQHA RRHLLQLSEA GQALFDEVLS RARPYQAALL NALTADERAM
LDRILDKLGR ASQALDQGLD QGLDQGLDA