Gene Daci_1645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1645 
Symbol 
ID5747202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1837270 
End bp1838202 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content64% 
IMG OID641296725 
Producthypothetical protein 
Protein accessionYP_001562673 
Protein GI160897091 
COG category[S] Function unknown 
COG ID[COG5449] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02218] phage conserved hypothetical protein BR0599 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.295696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGTG TGATTCCAAT TGCCTTGCAG CAGCACCTGG ACGGCGACGC CACCACTGTC 
TGCCTGCTGG TGCGTATCGA CCCTGTGGCG CCTGGGTTTG ACCCGGTGGG CGTGACCACG
CTGGACCGTG ACGTGTTGTT TGACGCCGGC ACGGGTGCGC TGCTGTACCG CGCGGCCGTG
GGTGTTGACT CCAGCGCGCG CGTGAGCAGC TCGGACATGG CAGTGGACAA CGCAGAGGGC
ACAAGCCTTG TGCCGGAGTT CGACGTGCCA GTATCGGAGC GCGACCTGGT GGCAGGCGCC
TACGACTACG CCCGCTGGAC CAGCTACCTT GTGAACTTCG AGGACACGAC GCAGTTTGTC
GAGCTGGCGC GCGGCGAGCT GGGCCAAGTG CGCGTGTCGC AAGGCATGTC GTTCACCTTC
GAGATGCTGG GGCTGACAAA GCGTCTCAAG CAGACCGTGG TTGAGAAAGA CTCGCTGCGC
TGCCGTGCGA TCTTCGGCAG CCAGCCGCTA GGCACCCCTG GCGCCACAGT GACTCAGCTC
TTCTACTGCG GGCGTGAGGT TGATGGTCTC TTTGTGGGAT CACACGTCGT TGCACCAGGG
GAGGAAAACA CAGTCAGCTT CAGCACTGCG CTGTCTGAGC CGGATGGCTA TTTCAAGCCC
GGCATGTTGC GATGGGTCAC GGGGGCAAAC GCGGGCCGCG TCTACGAGGT CGAGGAGCAC
AAGGCCGGGG TGCTGTCGCT CACCTTCGGG GCCATGTTCC CTGTCCAAGC GGGCGATGAA
TTTCGTGTCC GCCCCGACTG CACGAAGTGG AAGGATGGCC CGAACGGCTG CAAGCACTGG
TTCGGCGCCA ACTGGGTGCT GCACTACCGT GGAGAGCCGT ACATCCCCGT CGGCGACACG
GGCCAGATCA ACGCCCCAGG GGCCAGCGTA TGA
 
Protein sequence
MPRVIPIALQ QHLDGDATTV CLLVRIDPVA PGFDPVGVTT LDRDVLFDAG TGALLYRAAV 
GVDSSARVSS SDMAVDNAEG TSLVPEFDVP VSERDLVAGA YDYARWTSYL VNFEDTTQFV
ELARGELGQV RVSQGMSFTF EMLGLTKRLK QTVVEKDSLR CRAIFGSQPL GTPGATVTQL
FYCGREVDGL FVGSHVVAPG EENTVSFSTA LSEPDGYFKP GMLRWVTGAN AGRVYEVEEH
KAGVLSLTFG AMFPVQAGDE FRVRPDCTKW KDGPNGCKHW FGANWVLHYR GEPYIPVGDT
GQINAPGASV