Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1608 |
Symbol | |
ID | 5747165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 1804780 |
End bp | 1805337 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641296689 |
Product | XRE family transcriptional regulator |
Protein accession | YP_001562637 |
Protein GI | 160897055 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATGCAG AAATCCGTGT AATTTTTGGT GAACGCCTCC GTCAAGAGCG CGAGCGTCTC GGCCTGTCTC AAGCGGACAT GGCCAAGCTG GGCGGCACCA AAATGCGCAC TTATCAGGAC TGGGAGCGTG ACGTGGCAAC CGTCAGCGCC GAGTTTCTTG CACGGATTTC TGCGCATGGC CTGGACATTT CATTTGTTCT GACCGGCCTC CGCTCGTTTG ACCCGAACGC CATCCAGCAT GAGCGCCCTG AACCTACCCT CGCCGCCCGC CTGCAACAGG AGCGCCAGCG CCTGAACCTC AGCGAAGCCG AACTCGCCCG CAAGGCCGGC CAAGCCAAAC AGGTCCTGCA GCAATTCGAG TCCGGCGCCC TCGTCCCCGA CGCCACGGCG CTGCAGCAAT TGCACCTTGC CGGCGTCGAT ATCGGCTACG TGCTGCTGTC CCTGCGCTCC CATGCGCCCG ACGCCGATGT GCAGGCACTG CTGGCGCATT ACGGCAAGGC GACGGACGCT GGGCGTGCGC TGGTGCGAGG GGTGGCGGAG CTGGCCGGGC GGGGGTGA
|
Protein sequence | MNAEIRVIFG ERLRQERERL GLSQADMAKL GGTKMRTYQD WERDVATVSA EFLARISAHG LDISFVLTGL RSFDPNAIQH ERPEPTLAAR LQQERQRLNL SEAELARKAG QAKQVLQQFE SGALVPDATA LQQLHLAGVD IGYVLLSLRS HAPDADVQAL LAHYGKATDA GRALVRGVAE LAGRG
|
| |