Gene Daci_1608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1608 
Symbol 
ID5747165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1804780 
End bp1805337 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content65% 
IMG OID641296689 
ProductXRE family transcriptional regulator 
Protein accessionYP_001562637 
Protein GI160897055 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCAG AAATCCGTGT AATTTTTGGT GAACGCCTCC GTCAAGAGCG CGAGCGTCTC 
GGCCTGTCTC AAGCGGACAT GGCCAAGCTG GGCGGCACCA AAATGCGCAC TTATCAGGAC
TGGGAGCGTG ACGTGGCAAC CGTCAGCGCC GAGTTTCTTG CACGGATTTC TGCGCATGGC
CTGGACATTT CATTTGTTCT GACCGGCCTC CGCTCGTTTG ACCCGAACGC CATCCAGCAT
GAGCGCCCTG AACCTACCCT CGCCGCCCGC CTGCAACAGG AGCGCCAGCG CCTGAACCTC
AGCGAAGCCG AACTCGCCCG CAAGGCCGGC CAAGCCAAAC AGGTCCTGCA GCAATTCGAG
TCCGGCGCCC TCGTCCCCGA CGCCACGGCG CTGCAGCAAT TGCACCTTGC CGGCGTCGAT
ATCGGCTACG TGCTGCTGTC CCTGCGCTCC CATGCGCCCG ACGCCGATGT GCAGGCACTG
CTGGCGCATT ACGGCAAGGC GACGGACGCT GGGCGTGCGC TGGTGCGAGG GGTGGCGGAG
CTGGCCGGGC GGGGGTGA
 
Protein sequence
MNAEIRVIFG ERLRQERERL GLSQADMAKL GGTKMRTYQD WERDVATVSA EFLARISAHG 
LDISFVLTGL RSFDPNAIQH ERPEPTLAAR LQQERQRLNL SEAELARKAG QAKQVLQQFE
SGALVPDATA LQQLHLAGVD IGYVLLSLRS HAPDADVQAL LAHYGKATDA GRALVRGVAE
LAGRG