Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1587 |
Symbol | |
ID | 5747144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 1781189 |
End bp | 1782568 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641296668 |
Product | protein serine/threonine phosphatase |
Protein accession | YP_001562616 |
Protein GI | 160897034 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.661001 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGCTC TGGACCCCTC CTCCACGCAG CACCCTGCAG CGGATCAGCT ACCTGACCCT GCACCCGTTC CCGCGCTGGC CCCGGCGCCC GCCGCGCCGC GCCTTGTGGC CCGTGCAGGC CAGCTCAGCC AGCCCACGGC ACCGATCCCC CCCGAGGCCA GCAACGAGGA TGTGCACCGG CTGTTCAGCG AGCAGCCCCT GCTCGAAACC CTGGCCGTGG TGGCCGATGA CCGGCCGCTG GGCCTGATCA ACCGCCAGCG CTTCATGGAG CAGTACGCGC GGCCCTTTGC GCGCGACGTG TTCGGCCGCC GCAGCTGCCT GGTATTCACC GACACTGCGC CCATGGTGGT GGCGGCCGGC CTGCCCATCG ACCAGCTGGT GCAGCAGGCG CTGGCCAGCG GCAGCCGCGT GCTCAAGGAC GGCTTCATCA CCGTGGAGGA AGGCCGCTAC GCAGGCATAG GCACGGGCCA CGCGCTGATG GCCGCCATGT CCGACATCGA GGCCGACAAG ACGCGCCAGC TCATGGCCAG CATCGACTAC GCCAGCCTGA TCCAGCGCTC GCACCTGGTC GAATCCGACC GCGTGCTCGC CAGCCAGCTG GCCGACCACG GCCTGCTGTG GGAGCCGCGC GACGTGGTGG GCGGCGATGC GTATTTCTTC CGCGCCACAC CGCAGGGCCT GCTGGGCTGC ATGTTCGACT GCACGGGCCA CGGCGTGCCG GGCGCCTTCA TGACGCTGAT TGCGCTGTCC TTTCTCGAAC AGGCCGTGGC GCCTGCAGGT ATCGGCACCG GCACCGGCGC CGTCATCGAC CCCGGCGCCC TGCTGGGCCA GATGAACCGC TACATCAAGC GCGTGCTGCA GCAGCGCAGC CGCGACGTCC AGCCCGCCTG GGGCGCACCG GCAGCGCCCG CCGATGGCCT GCCCGCCGAA AAATCCTCCA GCGACGGCCT GGACGCCGCG CTGTTCCTGC AGTCGCCCTG CGGCACGCAA CTGCGCTTTG CCTCGGCCCG GCTGGACCTG CTGGTGGCGC CGCCCGGCGC GCAGGAGGCG GCCCAGGTGC AGATCCATGC CGGCGACAAG CTGGGCATAG GCTATGCGAC CACGCCCGAC GACGCGGCCT GGAGCACGCA GGAGCTGGAG GTCGCGCCCG GCTCGCTGCT GATGGTGGCC ACCGATGGCG TCATCGACCA ATTGGGCGGC CCGCGCCAGA TCGCCCACGG CAGAAAGCGC CTGGCGCGCT TCCTGCACGA GCAGCACGAC CGCCCCGCCG CCCAGGCATG CGCCGAATTC CGGCAGGCCT TTGCCCAGTG GCAGGGCACG CAGCGCCGCC GCGACGATGT CTCGCTGCTG GTGTGGCGCA ACCAGGCCCT GCAGCCATGA
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Protein sequence | MFALDPSSTQ HPAADQLPDP APVPALAPAP AAPRLVARAG QLSQPTAPIP PEASNEDVHR LFSEQPLLET LAVVADDRPL GLINRQRFME QYARPFARDV FGRRSCLVFT DTAPMVVAAG LPIDQLVQQA LASGSRVLKD GFITVEEGRY AGIGTGHALM AAMSDIEADK TRQLMASIDY ASLIQRSHLV ESDRVLASQL ADHGLLWEPR DVVGGDAYFF RATPQGLLGC MFDCTGHGVP GAFMTLIALS FLEQAVAPAG IGTGTGAVID PGALLGQMNR YIKRVLQQRS RDVQPAWGAP AAPADGLPAE KSSSDGLDAA LFLQSPCGTQ LRFASARLDL LVAPPGAQEA AQVQIHAGDK LGIGYATTPD DAAWSTQELE VAPGSLLMVA TDGVIDQLGG PRQIAHGRKR LARFLHEQHD RPAAQACAEF RQAFAQWQGT QRRRDDVSLL VWRNQALQP
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