| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1479 |
|---|
| Symbol | |
|---|
| ID | 5747035 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 1656749 |
|---|
| End bp | 1657678 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641296559 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_001562508 |
|---|
| Protein GI | 160896926 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2267] Lysophospholipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.940058 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAAAA TCTATGTACC GACCAGGGAT GGCCATGTCA TCGTGCTGAC GCGCATCGGC
CCTTCGGAGG GGCCAGTGGT GGCCGTGACG CATGGCACGT TTTCTAACGT CACGTCATGC
AAGAGACTAG GTAGATTCCT CGCTTTACAA GGTTATGGCG TTTGGCTGTT TGATTGGCGC
GGGCATGGGC TGAATCCGCC AACCACCCAC GACTACGACT TAGAAACGGT GGCCGAAGAG
GACATTGAAA GCGCTCTCGG TGAGATTCAT CGTCAAGAGG AGGGGCGGCG CTTGACGCTC
ATAGGGCATA GCGGTGGAGG TATTGCCGCT GCCATCTGGG CTGCGCGTCG GCCCGATCGG
GCGCATGCGT ATCTGGCTGG CCTAGTGCTG CTTGCCGCCC AGGTGACCCA TGCGGCGGCA
ACTTTTGCGT CGTGGGCTGC AATCAAGGGC TACAGGGCCT GGATTGCCCG CAGACAATGG
CTTACCGCGA GCGGCATGGT CGGTCCCGAG AGGGAAAGCG CCCGCCTGAT GCGCCAGTGG
TGCTATTGGA ACCTGCAGCG CAAATTCGTC GGTTATGACG GCATGGACTA TTTGCGCAGG
CTAACCGAGG TTCGTATTCC CGTTCTGGCG CTTGCGGGAT CTGCCGACCG TGTGATCGCC
CCTTGGCAGG GGTGCGAAGC TCTAGCCAGG GCTTTTGGAG GTAAGGACAT CGAATTCCTG
CTGTGCGGCA AGGCCACCTG TTTTCAGGAG GACTACAGTC ACAGCCGGCT GTTGATGGCG
GGCAACGCGC AGTCCGACGT ATATCCACGG ATCGCGCAGT GGATGAAGCT GAGGATCGGC
GCCGCATCAT CCTTAGAGCC TGCTCACGGT CTCGCGGGAG ACGGAGCGCA GTGCTCCGAG
GCGCCTCAAT ACACTCTTCC GCCCTTGTAG
|
|---|
| Protein sequence | MQKIYVPTRD GHVIVLTRIG PSEGPVVAVT HGTFSNVTSC KRLGRFLALQ GYGVWLFDWR
GHGLNPPTTH DYDLETVAEE DIESALGEIH RQEEGRRLTL IGHSGGGIAA AIWAARRPDR
AHAYLAGLVL LAAQVTHAAA TFASWAAIKG YRAWIARRQW LTASGMVGPE RESARLMRQW
CYWNLQRKFV GYDGMDYLRR LTEVRIPVLA LAGSADRVIA PWQGCEALAR AFGGKDIEFL
LCGKATCFQE DYSHSRLLMA GNAQSDVYPR IAQWMKLRIG AASSLEPAHG LAGDGAQCSE
APQYTLPPL
|
|---|
| |