Gene Daci_1399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1399 
Symbol 
ID5746954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1556658 
End bp1557677 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content66% 
IMG OID641296478 
Producthypothetical protein 
Protein accessionYP_001562428 
Protein GI160896846 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACC AAGTCACACG CCGCGACATT CTTCAAGGGC TGGCCGCCAT CGGCGGCACC 
AGCCTGCTGG CCACGGGTGC CACCAGCGCC CTCGCACAGG CCGGCAAGCC GGCAGCGTGG
CCCACCAAGC CCATCCGCGT GGTCGTGCCC TTCAACGCGG GCGGCGCCAC CGACATCATT
GCGCGCACCA TCGGCGAGGC CCTGGCCAGG CGCGTGGGCC AGCCCGTGGT CATCGACAAC
CGCGCGGGTG CGGCCGGCAT CCTGGGCACG GACGCCGTGG TCAAGGCGCC CGCCGATGGC
CACACCCTGC TGGTCTCGCT CAGCACCTCC ATGCTGATCA ACCAGTTCCT CTACACCAAG
CTGCCCTACA ACCCGCAAAA GGACATCGCC CTGATCACCC AGATCGCGGC GGCGCCCGTC
ACCCTGGTGG TCCATCCCTC GGTGCCGGCC AACAACATGA AGGAGCTGCT GGCCTATGTG
AAGGCCAACA AGGGCAAGCT CTCGTACGGC TCCTGGGGCG TGGGCTCGTA TGCCCACCTG
GCCGGTGCCT ACATGAGCAA GACCATGGAC GCCGACATGA CCCACGCCGC CTACAAGGGC
GAGGCGCCCA TGATCCAGGA GCTGATCGGC GGCCAGCTGC AGATGTGCTT TTCCAGCGCG
CTCAACACCA AGCCCTTCAT CGACTCGGGC AAGCTCAAGG CCATCGGCGT CACGGGCAAG
GAGCGCATGG AAATCCTGCC CAAGCTGCCC ACCATCCATG AGCAGGGCGT CACCGACGAC
GCATACGCCA TCTACGGCTG GGTGGCCATG GGCGCACCGG CCGGCGTGCC CAAGGAGATC
GTGGACCAGC TCTACGGCCA CCTGCGCGAA ATCGCCAAGG ACCCCAAGGT GCTGGAGCGC
ACCGTGGGAG CAGGCTTCAT GCCGCTGATG AACAGCCCGC AGGCCTTCCG CGAGAACTAC
CAGCGCGACA TGCCCATCTG GAAGGCGCTG GTCGATGAGG CTGGCGCAAA GCTTGATTGA
 
Protein sequence
MSNQVTRRDI LQGLAAIGGT SLLATGATSA LAQAGKPAAW PTKPIRVVVP FNAGGATDII 
ARTIGEALAR RVGQPVVIDN RAGAAGILGT DAVVKAPADG HTLLVSLSTS MLINQFLYTK
LPYNPQKDIA LITQIAAAPV TLVVHPSVPA NNMKELLAYV KANKGKLSYG SWGVGSYAHL
AGAYMSKTMD ADMTHAAYKG EAPMIQELIG GQLQMCFSSA LNTKPFIDSG KLKAIGVTGK
ERMEILPKLP TIHEQGVTDD AYAIYGWVAM GAPAGVPKEI VDQLYGHLRE IAKDPKVLER
TVGAGFMPLM NSPQAFRENY QRDMPIWKAL VDEAGAKLD