Gene Daci_1344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1344 
Symbol 
ID5746899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1498038 
End bp1498538 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content68% 
IMG OID641296423 
Producthypothetical protein 
Protein accessionYP_001562373 
Protein GI160896791 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGAAAT CCACGAAGGC CTCCGAGGCC TCCGAGGCGC CCGTGCAGTT CGAGCCCGAG 
TTCATCGCCG GGCTGCGCGA AGTGTTCGAG CGCCAGATCG CCTTCAACCA GGTGCTGGGC
CTGCGCATCA CCGAAGTGCT GCCCGAGCGG GTTGAAGGCC GCATCACCAT GCGACCCGAG
CTCATAGGCC ACGCCGCCTA CCAGCGCATC CACGGCGGCG TGATCAGCGC CGGCCTGGAC
TCCATGGGCG GCCTGGCCGT CATGGCGGCC ATCGGTGCCA AGCACATGGA CGATGCGCCG
CTGCAGCGCC TGCACCGCTT CTCGCGCCTG GGCACCATCG ACCTGCGCGT GGACTACCTG
CGCCCCGGCA TAGGCAGCGA ATTCATCCTG CGCGCCGAGG TGCTGCGGCT GGGTTCGCGC
GTGGCCAACA CGCGCATGGA ATTCCTGGGG GCCGATGGCA GCTTGCTGTC CACGGGGACG
GCGGCGTACA TCGTTTCTTG A
 
Protein sequence
MLKSTKASEA SEAPVQFEPE FIAGLREVFE RQIAFNQVLG LRITEVLPER VEGRITMRPE 
LIGHAAYQRI HGGVISAGLD SMGGLAVMAA IGAKHMDDAP LQRLHRFSRL GTIDLRVDYL
RPGIGSEFIL RAEVLRLGSR VANTRMEFLG ADGSLLSTGT AAYIVS