Gene Daci_1340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1340 
Symbol 
ID5746895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1494162 
End bp1495358 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content70% 
IMG OID641296419 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_001562369 
Protein GI160896787 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAA TCCAAGACGC CTACATCGTC GCCGCCACGC GCACGCCCAT CGGCAAGTCG 
CACAAGGGCT TTTTCCGCAA CTACCGTCCC GACGACCTGC TGGCGACCAC GCTGAAGGCC
GCGCTGGCCC AGGTGCCGGG GCTGGACCCG GCTGCCATCG AGGACATCAT CTGCGGCTGC
GCCATCCCCG AGGCCCAGCA GGGCCTGAAC GTGGCGCGCA TCAGCGCCGT GCTGGCGGGC
CTGCCCACCA GCGTGGGTGG CATCACCGTG AACCGCTTCT GCGCCTCGGG CCTGTCGGCC
GTGGCCATGG CGGCGGACCG CATCCGCGTG GGCGAGGCCG ACGTGATGAT CGCGGCCGGC
GTCGAGAGCA TGAGCATGGT GCCCATGATG GGCAACGCGC CCTCGCTGTC GCCGTCCATC
TTCGAGCGCG ATGGCGACGT GGGCATTGCC TATGGCATGG GCCTGACGGC CGAGAAGGTG
GCCCAGCAGT GGAAGGTCTC GCGCGATGCG CAGGACGCCT TTGCGCTGGA GTCGCACCGC
CGTGCCCTGG CCGCGCAGCA GGCCGGCGAG TTCAAGGACG AGATCACGCC CATCGAGGTC
ACCGACCGGG GCCTGGACCT GGCCAAGGGC GAACCCGTGG TGCGCACGCG CACCGTGGAG
CTGGACGAGG GCGCACGCCC CGACACCAGC CTGGAAGGCC TGGCCAAGCT GCGCACCGTG
TTCGCGGCGC GCGGCTCGGT GACGGCCGGC AACAGCTCGC AGACCAGCGA TGGCGCAGGC
GCGCTGATCC TGGCCAGCGG CGCAGCCGTG CAGCGCTTCG GCCTCACGCC GCTGGCGCGC
TTCGTGAGCT ATGCCAGCAA GGGCGTGCCG CCGGCCATCA TGGGCATCGG CCCCATCGAA
GCCATCCCGG CCGCGCTGCG CTATGCGGGC CTCAAGCAGG ACGACATCGA CTGGTTCGAA
CTCAACGAAG CTTTTGCCGC CCAGTCACTG GCCGTGGTCA ACACGCTGGG GCTGGACCCC
GCCAAGGTCA ATCCCATGGG CGGTGCCATC GCCCTGGGCC ACCCGCTGGG TGCCACGGGC
GCCATCCGCT CTGCCACCGT GGTGCATGCG CTGCGCCGCA AGCAATTGCG CTACGGCATG
GTGACGATGT GCGTCGGAAT GGGCCAGGGC GCCGCCGGCA TCTTCGAGCG GGTCTGA
 
Protein sequence
MKQIQDAYIV AATRTPIGKS HKGFFRNYRP DDLLATTLKA ALAQVPGLDP AAIEDIICGC 
AIPEAQQGLN VARISAVLAG LPTSVGGITV NRFCASGLSA VAMAADRIRV GEADVMIAAG
VESMSMVPMM GNAPSLSPSI FERDGDVGIA YGMGLTAEKV AQQWKVSRDA QDAFALESHR
RALAAQQAGE FKDEITPIEV TDRGLDLAKG EPVVRTRTVE LDEGARPDTS LEGLAKLRTV
FAARGSVTAG NSSQTSDGAG ALILASGAAV QRFGLTPLAR FVSYASKGVP PAIMGIGPIE
AIPAALRYAG LKQDDIDWFE LNEAFAAQSL AVVNTLGLDP AKVNPMGGAI ALGHPLGATG
AIRSATVVHA LRRKQLRYGM VTMCVGMGQG AAGIFERV