Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1279 |
Symbol | |
ID | 5746834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 1422776 |
End bp | 1423657 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641296358 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001562308 |
Protein GI | 160896726 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | [TIGR03339] aminoethylphosphonate catabolism associated LysR family transcriptional regulator |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGTCA CGCAGCTCAA GTCCTTTTTC TGGGTCGCCC GCCTTGGCAG CATCACGCAA GCCGCGCGCC AGCTCGCACT GAGCCAGCCC ACCGTGACCA CCCAGATCCG CGCGCTGGAA GAGCACTACG GCGTGGAGCT GTTCCATCGC CAGGGCGGAC GGCTGTCCAT CACCGATGCC GGCTTGCGCC TGCTGCCCCA GGTCGAGCAA TTGCTGCTGC AGACCATCCA GCTGGAGTCG GCGCTGCGCC ATTCGGGCGA TGCCAGCCAG GGCCAGCTGC GCATAGGCGC GACGGCGCCC TACTACGTGC TGGACATCGT CAAGCGCTAC CAGCGGCGCT TCGAGCGGGT GGAAGTGGCC ATCGTGGGCG GCAACTCGCG CCAGATGGTG CAGGCGTTGG TGGACTACCA GGTGGACCTG GCGACCTCAT CGCACCTGGA AGGTGATCCG CGCCTGCTGC GCGTGGAGCT GGGCCAGGAC CCGCTGGCCC TGCTGGTGCA CCGCAGCCAC CGGCTGGCGC AGCGCACCAT GGTGCAGGCG TCCGATCTGG TGCACGACAC GCTGATCCTG CGCGAGCGCG GCTCCATGAC GCGCCAGCTC ACCGAGCAGA TGCTGGCCGC CGCCGGCCTG GCACCGCGCC ACATCATGGA AATCGCCAGC CGCGAAGCCA TCCGCGAGGC CGTGATCCGC GACATGGGCA TCAGCGTCTT CGCCCGGCAT GAAGCCTCGG CCCACCCCGA CATAGTCGTC CTGCCCTTCG CAGGCCCCGT GCCGCGCCTG CCCGAATACC TGTACTGCCT GCGCGAACGC CGCCAGGCCC GGCTGATCGC CGGCTTTCTG GAGGAAGCCG TGCCGGGCGG TGTGCTGCCG GACCAGATGT GA
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Protein sequence | MFVTQLKSFF WVARLGSITQ AARQLALSQP TVTTQIRALE EHYGVELFHR QGGRLSITDA GLRLLPQVEQ LLLQTIQLES ALRHSGDASQ GQLRIGATAP YYVLDIVKRY QRRFERVEVA IVGGNSRQMV QALVDYQVDL ATSSHLEGDP RLLRVELGQD PLALLVHRSH RLAQRTMVQA SDLVHDTLIL RERGSMTRQL TEQMLAAAGL APRHIMEIAS REAIREAVIR DMGISVFARH EASAHPDIVV LPFAGPVPRL PEYLYCLRER RQARLIAGFL EEAVPGGVLP DQM
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