Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1190 |
Symbol | |
ID | 5746745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 1324854 |
End bp | 1326023 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641296270 |
Product | major facilitator transporter |
Protein accession | YP_001562220 |
Protein GI | 160896638 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCGTGG GTGTCATGGG CACGGCCCTG GCCAGCCCGC TGTACCCGCT GTACCAGCAG GCCTGGGGGC TGCAGCCCAG CCACATCACG CAGATCTTCG TGGCCTATAT GTTCGGCGCG CTGGCCAGCC TGCTGTTCCT GGGCCGGCTG ACCGACCGTT TCGGCTTTGT CACCGTGCTG CGCGCCGGGC TGATCCTGAT GACGCTGGGC GTGCTGGCCT CCACCGTGGC CTGGAACGTG CCCAGCTTTG CGCTGGGGCG CGTGGTGATC GGCGTGGCTT CTGGGCTGAT CACCACCTCG GCCTCGGTAG GCATGACCCG GCTCAACAAC CGGGGCGACC TGCAGCGCGC CGCGGCCACG ACCAGCCTGA CCATTGCCTT CGGCTTCGGG CTGGGCCCCG TGGTGGGCGG GCTGATCGCG CAGTGGCTGC CCTGGCCGCT GGTCACGGCC TACATCCCCT CGCTGGGGCT GGGGCTGCTG GCCATCTATG CGCTGTACCA GGTGCGCATC GCCGAGCCGG CCGAGCTGGC ATCCACCCAG GCACGCGCGC TGCACTGGCG CGATTTCATG CCCACCATCA CGCTGCCGGA GCGGCGCTTT GCGCGCCACT ACGCACTGGG CGGCATGTGC GCGTTCTGCG CCTTCGGCAT GTTCAGCCTG TTCGCATCGC TGGCGCCCAG CTTCATGCAG CGCATGGTGC CCTGGCACGG GCCGGCTGTC TCGGGCCTGT CCATCGGCGT GATCCTGTTC CTCTCGGCGG GCTTCCAGTA CCTGGCGCGC CCGCGCCCGA CCAAGGGCTC GGCCATTGTG GGCTTTGCCT GCCTGGTGGC CTGCAACCTC CTGCTGCTGG TCAACAGCTT CGCGGGCTCG GCCCTGCTGT TCGCGCTCAG CGTGATCACC ACGGCGGCGG GCCACGGCCT GTGCAACCTG GCGGGCATGT CCATCGTCAA CAAGGTCTCC ACGCCGGCCA CGCGCACGGG TCTGCTGTCC ACGTACCTGG TAGTCGGCTA CCTGGGCACC ATCGTGCCCA TCCTCGGCCT GGGCTGGCTC TCGGACCATA TCGGCATCAC CGAGGCCCTG GTCGCCTACT GCATCGTCAT GGGTGCGCTG GCCGGCTGGC TGTGCTGGAT GTGCACGCGC ACGCCCACGC TGCCCATGCC CAAGCACTAG
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Protein sequence | MCVGVMGTAL ASPLYPLYQQ AWGLQPSHIT QIFVAYMFGA LASLLFLGRL TDRFGFVTVL RAGLILMTLG VLASTVAWNV PSFALGRVVI GVASGLITTS ASVGMTRLNN RGDLQRAAAT TSLTIAFGFG LGPVVGGLIA QWLPWPLVTA YIPSLGLGLL AIYALYQVRI AEPAELASTQ ARALHWRDFM PTITLPERRF ARHYALGGMC AFCAFGMFSL FASLAPSFMQ RMVPWHGPAV SGLSIGVILF LSAGFQYLAR PRPTKGSAIV GFACLVACNL LLLVNSFAGS ALLFALSVIT TAAGHGLCNL AGMSIVNKVS TPATRTGLLS TYLVVGYLGT IVPILGLGWL SDHIGITEAL VAYCIVMGAL AGWLCWMCTR TPTLPMPKH
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