| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1057 |
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| Symbol | |
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| ID | 5746612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 1167518 |
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| End bp | 1169191 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641296137 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001562087 |
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| Protein GI | 160896505 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.553694 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTTTCCC AATCGAAGGC GGGTCAGGTG GCATGGAAGG CCGCGATAGC GGTATTGGCG
GGCAGCAGCC TGCTGCTGGC GGCTTGCTCC AGGCAGGCCG ATACGGCCCA GGCGGGCGCG
GCTGCCGGCC CCGTGGAAGG CGGCACCCTG GTCTACCTGG AGCAGCAGGC CCATACCAAC
CTCTATCCGC CGGCCGGGGG CTTCTATCCC AACGGCGGCG TGCTCAACCA GATCACCGAC
AAGCTGACCT ACCAGGACCC GAAGACGCTG GAGATCCAGC CCTGGATCGC CGAGTCCTGG
ACCGTGAATG CCGACGCCAC CGAGTACAGC TTCAAGCTGC GGCCCGGCGT CACCTTCTCC
GACGGCACGC CGCTGGACGC GGCGGCCGTG GCGCGCAACT TCGACACCTA TGGCCTGGGC
AACAAGGCGC TCAAGCAGCC CGTGTCCGAG GTGATCAACA ACTACGAACG CAGCGAGGTG
GTCGACCCGC TGACGGTGAA GTTCTTCTTC AGAAAGCCTT CGCCGGGCTT TCTGCAGGGC
ACTTCGGTGA TCGGCTCGGG CCTGGTCTCG CCGGCCACGC TGGACCGCCC CTTCGAGGAG
CTGGGCGACG CCACGCGCAT CATCGGCTCC GGCCCCTTCG TGGTGGCCAG CGAGACGCTG
GGCAAGGAGC TGGTGCTCAA GGTGCGCAAG GACTATGCCT GGGGTCCCGC CAAGCTGGCC
CATCAGGGCC GCGCTCGGCT GGACGAGGTG AAGTTCATCG TCACGCCCGA GGACAGCGTG
CGCATCGGCG CGCTGCTGGC CGGCCAGGCC GGGCTGATCC GCCAGATCCA GGCCTATGAC
GAAAAGCGCG TCGAGGACCA GAAGTTCAGC ATCTACGCCC CGCCCACGCG CGGCGTGAAC
AACAGCGTGG CCATCCGCCC GGACAACGCC CTGGTGGCCG ATCTCAAGGT GCGCCAGGCC
CTGCTGCATG GCACCAATGC CAAGGAGATC GTGGAGACGC TGTTCTCGCC GCGCTATCCG
CAGGCGCGCT CGGTGATTGC CTCCACGGCG GCCGGCTTCG TGGACCTGTC GGCCAAGCTG
GCCTATGACG AGGCCAAGGC GAAACAGCTG CTGGACGAGG CCGGCTGGAC GCTGGGCGCC
AACGGCCTGC GCCAGAAGGA CGGCCGCGAT TTCGTGCTGT CCACCTACGA GTCCCTGCCC
CAGCCGCAGA ACAAGGAGAC GCTGCAGCTC GTGGCCCAGC AGTGGGCGCG CATCGGCGTC
AAGCTCAACG TGCTGTCGGG CGACGCGGGC AGCCGCGCCG TGGACACGCT GGACCCCGAC
AAGACCGGCG TGCTGCCCGG CATGGTGGGC CGCGCCGATC CCGACGTGAT CAAGAGCAAC
TACTACCCGA CCAACCGCAA CGTGCTGCTG CAAAAGGGCG GCGTGAGCCA GAAGGTCAAG
TCCTTCGAGG ACACCAGGCT CAACGGCCTG TTCGACGCCA TCGCGGCCGA GACCGATGCC
GCCAGGCGCC TGGCGCTGGC CGGCGAGGTG CAGAACTACC TGATCGACCA GGCCTATGTG
ATCCCCATCT TCGAGGAACC CCAGGCCTTT GCGGGCGCAG GCTGGGTGCG CGACGTGGGC
TTCGAGGCCG TGGGCCGGCC CAGCTTCTAC AGCACCTGGC TGGCCAGGCG CTGA
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| Protein sequence | MFSQSKAGQV AWKAAIAVLA GSSLLLAACS RQADTAQAGA AAGPVEGGTL VYLEQQAHTN
LYPPAGGFYP NGGVLNQITD KLTYQDPKTL EIQPWIAESW TVNADATEYS FKLRPGVTFS
DGTPLDAAAV ARNFDTYGLG NKALKQPVSE VINNYERSEV VDPLTVKFFF RKPSPGFLQG
TSVIGSGLVS PATLDRPFEE LGDATRIIGS GPFVVASETL GKELVLKVRK DYAWGPAKLA
HQGRARLDEV KFIVTPEDSV RIGALLAGQA GLIRQIQAYD EKRVEDQKFS IYAPPTRGVN
NSVAIRPDNA LVADLKVRQA LLHGTNAKEI VETLFSPRYP QARSVIASTA AGFVDLSAKL
AYDEAKAKQL LDEAGWTLGA NGLRQKDGRD FVLSTYESLP QPQNKETLQL VAQQWARIGV
KLNVLSGDAG SRAVDTLDPD KTGVLPGMVG RADPDVIKSN YYPTNRNVLL QKGGVSQKVK
SFEDTRLNGL FDAIAAETDA ARRLALAGEV QNYLIDQAYV IPIFEEPQAF AGAGWVRDVG
FEAVGRPSFY STWLARR
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