Gene Daci_0790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0790 
Symbol 
ID5746344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp880059 
End bp881045 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content72% 
IMG OID641295870 
Producthypothetical protein 
Protein accessionYP_001561821 
Protein GI160896239 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCACT TCACTTCACG CCGCAGCCTG TGCGCCCTGC TGCTGGCCGC AGGCGCCGCA 
CCGGGCGCCA TGGCGGCCGA TGCCGGCGCC TATCCCACGC GCCCGGTGCG CCTGATCGTG
CCGTTTGCGG CCGGCGGCAC CACCGACATC GTCGCGCGCG CGATTGCGCC GCGCATGGCA
GAGGCCCTGG GCCAGCCGCT GGTGGTGGAC AACAAGGGCG GCGGCGGAGG CGCCATCGGC
GCGCACGAGG CCGCGCGCGC CCAGCCCGAC GGCTACACGC TGGGCGTGGC CACCGTGTCC
ACCACGGCCA CCAATCCGGC CATCAACCCG CGCCTGCCCT ACAACCCGCT CACCGATTTC
ACGCCCATCA CCAACATTGC GGCCACGCCC AATGTGCTGG CCGTGCATCC GGGCTTCAAG
GCGCAGAGCT TTGCGGCCTT CGTGGACGAG GTCAAGAAGA ACCCCGGCAA GCATGCCTAC
GGCACGGCGG GCACGGGCTC CATAGGCCAC ATGCTGATGG AGCTGATGTC CAGCCGCTCG
GGGCTGTCGC TCACGCATGT GCCCTACCGG GGATCGGGCC CCGCGCTCAA CGATGCGGTG
GCGGGCCAGG TGCCCATCGT CTTCGACAAC CTGCCCTCGG CCCTGCCCTT CATCAAGGCG
GGCCGGCTCA CCGCGCTGGC GGTGGCCGCG CCAGAGCGCC TGGCCCAGCT GCCCCAGGTG
CCCACCTTCA AGGAGCTGGG CCTGGAGCCG GTCAACCGCA GCGCCTTCTA TGGCATCTAC
GGCCCCAAGG GGCTGTCGCC CGAGATCGTG GCGCGCCTGC ATGCGGCCGC CCAGCGCGCG
CTGGCCAGCC CCGAGGTGCG CCGCCAGATC GAGGACACGG GCTCGCGCGT GATCGGCAAC
CGCCCCGAGG AGTTCGCGCG CGAGATCGCG GCCGAGAACG CCCTGTACCG CAAGATCGCC
ACGGAGCGGC GCATCGTGGC GGATTGA
 
Protein sequence
MNHFTSRRSL CALLLAAGAA PGAMAADAGA YPTRPVRLIV PFAAGGTTDI VARAIAPRMA 
EALGQPLVVD NKGGGGGAIG AHEAARAQPD GYTLGVATVS TTATNPAINP RLPYNPLTDF
TPITNIAATP NVLAVHPGFK AQSFAAFVDE VKKNPGKHAY GTAGTGSIGH MLMELMSSRS
GLSLTHVPYR GSGPALNDAV AGQVPIVFDN LPSALPFIKA GRLTALAVAA PERLAQLPQV
PTFKELGLEP VNRSAFYGIY GPKGLSPEIV ARLHAAAQRA LASPEVRRQI EDTGSRVIGN
RPEEFAREIA AENALYRKIA TERRIVAD