| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0735 |
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| Symbol | |
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| ID | 5746289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 814072 |
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| End bp | 816597 |
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| Gene Length | 2526 bp |
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| Protein Length | 841 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641295815 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001561766 |
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| Protein GI | 160896184 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.310558 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCACA GAGCCGCCAT GCATCGCTTC CTGGGGGCCA GGCGCAGCGC CCACATCAAA
GCCTTGATCC TGAGCTTTGC GCTGTGCGTG CTGGCGGGGC TTGTGCTCTT CATCTGGGGC
CAACTGCACA CCCAGGCCGA GCAAAGCAGA TCCCAGGCCG CGTTGCTCAG CCGTGTACTG
GAAGATCAGA CCGGCAAGAC CTTCGAGACC GGCGAGGTGG TCCTGGCGAG CCTGTCCCAC
AATCCGGTCA TCCTGTCCGC CGACAGCCCG CGCGCCGCGC GCGAGGCGGC CATGGCGCAA
GTGGTCGCCC AACTTCCGGT TCTGCGCAGC ATGGCGCTGC TCGATGGCCA GGGCCACATC
CTGGCGAGCA CGCAGGCGGG CGAAGCCGGC CTGCAGGTCG AGGTGCAGCA GTTGCTGCCG
GACAATGCAT CGGCTCCGGT CCTGGGCAAG GTGCAACTGG GACGCCTTGT CACCGGCCGC
AGCCTCTCTT CCCTGACATT GGCCCCGCAT GCAACACCGC GGGGCGTCCA CTACCTGCCC
CAGATCCTGG CCTTCAAAAA CGACAGCGGC GCACCCGCCG TGCTGGTGGG ACTGATCAAT
CCCGATGCCG TGGCCAACTT CTACCAGGCC ACGCTGGAAA CCCTCAGCTA CGAGGCGGTG
CTGCTGAGCT ACGACGGCCA ACCGCTGGCC AGCACAAACG CAGGCGGGGG CGTACAGACG
GCCTCTGCAC GCAAGACCCC CATCTTCCAG AAATGGCTGC CAGGCAGCGA ATTCGGCTCC
TACATTGGCG CCGGGCTGCT CGGCCCCCAT GAGATCGTGT CCTTTCGCAC GGTCCGCAAC
TGGCCCCTGC TGCTGGTGGT GGAGGAGCCC TACGCGGCGG TGATCGCGCG CTGGCTTGAC
GATGCCTTCG CCTTCTTCGT TGCCGGACTT GCGCTTCTTG CCCTGGTGCT CGGCCTGAGC
GGATCGGTGC TCAAGACCCG CAGGGTCCAG CAGTCGGCCC AACAGGCCAT GGAAAAGGCC
CAGGCGCGCA TAGCCCGCAG CGAGCATGAG ATGGCCGTGC TCATGCGCAG CGTGCAGGAG
CTGATCTTCC GAACCGACAG CCACGGCCGG CTGACCTTCG TGAACGCCCG CTGGGAGCAG
TGGACCGGGC AGCCCAGCGC CGAGGCGGTA GGGCAGCCGC TGGAGGGCAT CGTGCATGAA
GCCTGCAGGC CCCAGATCCA GGCACTGCTC GACCCCCAGG CCAAGCTGGC CCTGCGCAAC
TGCCAGGCGC GCTTTCGCCT TCCCGACGAA AGGGAAATAC TCTGCGACAT CGCCGTAGTG
CCCCTGCTGC GCGAGGGCCG GCTGGTGGGC TTTGCCGGCA GCGCCGTGGA CGTGACCGCC
CGCTGGAAGG CCCAGCAGGA GCTGCAGACC CAGCTGGCCT TCCAGCACCT GCTGTTCGAG
ACCACGCCCC TGCCCATGCT GGTCACCGAC GCGGACCAGC GCGTGGCCCT GGTCAACAAG
GCCTGGGAGG ACTTCTTCGG CCGGGGCCGC TACGCCGTGC TCGGCAATGA GGTCGAGGGC
CTGCACTCGG GCGACCATGA CCTGCTGCAG ATGCACAGCA ATCAGGACGT GATGCGCTCC
GGCCAGCCCA TGGTGCTGGA GGCCCGGCTG CCCCATGTGG ACGGCAGCTA CCGCGACGTG
CAGATCTCCA AGGCCGCGGT GAAGAACGCC CAGGGCCGGA TCACCGGCGT GCTCAGCATT
TTTGTGGACG TGAGCGAATT CCGCGCGGCC GAGCATGCCA CCCACGAAGC CCGCGACGCG
GCCGAAGAGG CCTTCCGCGT GAAATCGGAA TTCGTGGCCA ACATGAGCCA CGAGCTGCGC
ACCCCGCTGC AGTCCATCAT GGGCTTTGCC GAGCTGGGCG GCCTGCGCTC TCACGGCAAT
GCCGCGATGG CAGAAATGTT CAGCGACATC CATGCAGCCG GCCAGCGCAT GCTGGCCCTG
GTCAACGACC TGCTGGATGT CGCCAAGCTG GAAAGCGCCG TGGGAACCAT CCACCTGGAA
CGCACCGACC TCAGGAGCCT GATACGGCCC GTGGTGCGCG AGCTGGAGCC GCAGCAGCAG
CACAAGCTCA TCGACCTGCG GCTGGAGCTC GACGACACGC CGCTGATCGC CAAGGCCGAC
CCCGTGCGCT TTCAGCAGGT GGTGCGCAAT GTGCTGGCCA ATGCCATCAA GTTCTCGCCC
ATTGGCGGGC GCATCGATGT GCAGGGCCGC ATCGACGGAC AGGGCGACAT CTGCATTGCC
GTCTCCGATC AGGGCCCGGG CATTCCGCCG CAGGAACTGG ACAAGATCTT CCAGCCCTTC
GTGCAGTCCA GCAAGACCAA GAACGGCTCG GGCGGCACGG GCCTGGGCCT GGCCATCTGC
CGCAAGATCA TCGACGCCAT GGACGGCACC ATCGTCGCCA GCAACGGCCC CGCGGGAGGC
GCCATGTTCT GCATCACCTT GCCCACCCGC AATGCCATGG AAACCCGTCC AGCCGAGTTG
ACATAG
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| Protein sequence | MPHRAAMHRF LGARRSAHIK ALILSFALCV LAGLVLFIWG QLHTQAEQSR SQAALLSRVL
EDQTGKTFET GEVVLASLSH NPVILSADSP RAAREAAMAQ VVAQLPVLRS MALLDGQGHI
LASTQAGEAG LQVEVQQLLP DNASAPVLGK VQLGRLVTGR SLSSLTLAPH ATPRGVHYLP
QILAFKNDSG APAVLVGLIN PDAVANFYQA TLETLSYEAV LLSYDGQPLA STNAGGGVQT
ASARKTPIFQ KWLPGSEFGS YIGAGLLGPH EIVSFRTVRN WPLLLVVEEP YAAVIARWLD
DAFAFFVAGL ALLALVLGLS GSVLKTRRVQ QSAQQAMEKA QARIARSEHE MAVLMRSVQE
LIFRTDSHGR LTFVNARWEQ WTGQPSAEAV GQPLEGIVHE ACRPQIQALL DPQAKLALRN
CQARFRLPDE REILCDIAVV PLLREGRLVG FAGSAVDVTA RWKAQQELQT QLAFQHLLFE
TTPLPMLVTD ADQRVALVNK AWEDFFGRGR YAVLGNEVEG LHSGDHDLLQ MHSNQDVMRS
GQPMVLEARL PHVDGSYRDV QISKAAVKNA QGRITGVLSI FVDVSEFRAA EHATHEARDA
AEEAFRVKSE FVANMSHELR TPLQSIMGFA ELGGLRSHGN AAMAEMFSDI HAAGQRMLAL
VNDLLDVAKL ESAVGTIHLE RTDLRSLIRP VVRELEPQQQ HKLIDLRLEL DDTPLIAKAD
PVRFQQVVRN VLANAIKFSP IGGRIDVQGR IDGQGDICIA VSDQGPGIPP QELDKIFQPF
VQSSKTKNGS GGTGLGLAIC RKIIDAMDGT IVASNGPAGG AMFCITLPTR NAMETRPAEL
T
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