Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_0675 |
Symbol | |
ID | 5746228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 748198 |
End bp | 749805 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641295754 |
Product | regulator of RNA terminal phosphate cyclase |
Protein accession | YP_001561706 |
Protein GI | 160896124 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG4650] Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAGA AAAAGGTCGT CATCGGCTTT CTGGGTACGC AGCTGGACTC CGGCAGGGGC GCGGGGCGCT GGGAAAAATG GCGGCCGACC CTCTCCCTCA TGCAGCATGA GGATCTGGTG GTGGAGCGGC TGGAGCTGCT CTACACGCCG CCCCATCTGG CCCTGGCGCA GCTGCTGCAG GGCGACATCG CCACGGCATC GCCCGAGACC CAGGTGAACC TCGTGCCCAT GGACATTGCC GATCCCTGGG ATTTCGGCGA GGTCTATGCG CGGCTGTTCG ACTGGACGCA GGCCTACCGC TTCGACCCCG AGCGCGAGGA GTACTGGACG CACATCACCA CGGGCACGCA CGTGGCACAG ATCTGCCTGT TCCTGCTGGT GGAGTCGCGC CGCATTCCCG GCGTGCTGGC CCAGACGTCG CCACCCCGGC GCCAGCGCAT GGGCGACCCT GGCAGCTATG CGCTGATCGA CCTGGACCTG TCGCGCTACG ACGTGATCGC CCAGCGCTTC GGCGCCGAGC AGAGCGAGGC CGTGCAATTT CTCAAGAGCG GCATCGCCAC GCGCAATGCC GGGTTCAATG CGCTGATCGA CGAGATCGAG CGCGTGGCCG TGCGCTCGCG CGCGCCCATC CTGCTCACGG GTCCCACGGG TGCGGGCAAG TCGCATCTGG CGCGGCGCAT GTACGAGTTG AAGAAGGCCA GGCACCAGGT TCAGGGCGAC TTCGTGGAGG TCAATTGCGC CACGCTGCGC GGCGATGGTG CGGCCTCGGT GCTGTTCGGC CACAAGAAGG GCGCGTTCAC GGGCGCTGCG GCCGACCGCG CCGGCCTGCT GCGCAGCGCG CACCAGGGCG TGCTGTTCCT GGACGAAATC GGCGAGCTGG GCCTGGACGA ACAGGCCATG CTGCTCAAGG CGGTGGAGGA AAGGCGCTTC TATCCCATGG GCAGCGACCG CGAGGTCAGC AGCGACTTCC AGCTGGTCGC CGGCACGCAC CGCGACCTGC GCATCGACGT GGCGCAGGGG CGCTTTCGCG AGGATCTGTT CGCGCGCATC AACCTGTGGT CCTACGCGCT GCCGGGCCTG GCCGGGCGCC CCGAGGACAT AGAACCCAAC ATGGACCACC TGCTCGCGCG CTCGGCCGAC GAGACCGGCC AGATGGTGCG CTTCAACGTG GAGGCCCGCG AGCGCTATCT GCGCTTTGCG CGCTCGCCCG AGGCGCTGTG GAGCGGCAAC TTCCGCGACC TGTCGGCCAG CATGACGCGC CTGGCCACGC TGGCCGACGG GGGGCGCATC TCCACGGCCC TGGTCGATGC CGAGATCCAG CGCCTGAAGT GGCTGTGGCA AAGAGGCGAT GCCGTGCAAC CGGCCAGCGC CAGCCTGCAA AGCCTGCTGT CTGCCGAAGT GCTGGAGCCG CTGGATCTGT TCGACCGCAT GCAGCTCGAA GCGGTGCTGC GCGTGTGCCG AGAGTCGCCT TCGCTGTCCG ATGCGGGGCG CCGCCTGTTC GACCAGTCAC GCACCCAGCG CAGCGTGGTC AACGATGCCG ACCGCCTGCG CAAGTACCTG CTGAAATTCG GCTTGAAGTG GGATGCCGTG GCCGGCCGAA CGCCATAG
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Protein sequence | MEKKKVVIGF LGTQLDSGRG AGRWEKWRPT LSLMQHEDLV VERLELLYTP PHLALAQLLQ GDIATASPET QVNLVPMDIA DPWDFGEVYA RLFDWTQAYR FDPEREEYWT HITTGTHVAQ ICLFLLVESR RIPGVLAQTS PPRRQRMGDP GSYALIDLDL SRYDVIAQRF GAEQSEAVQF LKSGIATRNA GFNALIDEIE RVAVRSRAPI LLTGPTGAGK SHLARRMYEL KKARHQVQGD FVEVNCATLR GDGAASVLFG HKKGAFTGAA ADRAGLLRSA HQGVLFLDEI GELGLDEQAM LLKAVEERRF YPMGSDREVS SDFQLVAGTH RDLRIDVAQG RFREDLFARI NLWSYALPGL AGRPEDIEPN MDHLLARSAD ETGQMVRFNV EARERYLRFA RSPEALWSGN FRDLSASMTR LATLADGGRI STALVDAEIQ RLKWLWQRGD AVQPASASLQ SLLSAEVLEP LDLFDRMQLE AVLRVCRESP SLSDAGRRLF DQSRTQRSVV NDADRLRKYL LKFGLKWDAV AGRTP
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