Gene Daci_0568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0568 
Symbol 
ID5746111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp624251 
End bp625033 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content72% 
IMG OID641295637 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001561599 
Protein GI160896017 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID[TIGR02280] phenylacetate degradation probable enoyl-CoA hydratase paaB 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCCAT CGCTGGTTCT GGTTGAGCAG CAAGACGCCG TCCGCACCCT GGTGCTGAAC 
CGCCCCGACG CGCTCAACAG CTTCAATGCG CAACTGCACG AGCAGCTGCT TTCGGCCCTG
GAGCAGGCCG CCGGCGATGC CACGGTGCGC TGCGTGGTGC TCACGGGCGC AGGGCGCGGC
TTTTGCGCGG GCCAGGACCT GTCCGACCCC GAGGCCGCGC CCGACCAGAA CCTGGGCGAC
CTGATCGAGC GCCGCTACCA GCCGCTGTGC CTGCGGCTCA AGTCCATGCC CGTGCCTGTG
GTGGCCGCCG TCAATGGCGT GGCCGCAGGC GCGGGCGCCA ATATCGCGCT GGCCTGCGAC
CTGGTGCTGG CCGCGCGCTC GGCCAGCTTC ATCCAGGCCT TTGCCAAGAT CGGCCTGGTG
CCCGACTGCG GCGGCACCTG GCTGCTGCCG CGCCTGGTGG GCCGTGCGCG CGCCCTGGGC
CTTGCGCTGC TGGGCGACAA GCTGCCTGCG GCCGAGGCCG AACGCATCGG CCTGATCTGG
CGCTGCGTGG AAGATGCCGA TTTGCGCAGC GAGGCCCAGG CCCTGGCGCA GCGCCTGGCC
GCCATGCCGG TGCGGGCCCT GGCGCGCACG CGGGAGGCCA TGGACTCGGC CCAACTGCTG
GACTACGAAC ATGCGCTCAC GCGCGAGGCG CGCCAGCAGG GCCAGCTGGG CGCGGCCCAC
GACTACCAGG AGGGCGTGGC CGCCTTCCTG GGCAAGCGGG CTGCCGTGTT CTCGGACCGT
TGA
 
Protein sequence
MPPSLVLVEQ QDAVRTLVLN RPDALNSFNA QLHEQLLSAL EQAAGDATVR CVVLTGAGRG 
FCAGQDLSDP EAAPDQNLGD LIERRYQPLC LRLKSMPVPV VAAVNGVAAG AGANIALACD
LVLAARSASF IQAFAKIGLV PDCGGTWLLP RLVGRARALG LALLGDKLPA AEAERIGLIW
RCVEDADLRS EAQALAQRLA AMPVRALART REAMDSAQLL DYEHALTREA RQQGQLGAAH
DYQEGVAAFL GKRAAVFSDR