| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0432 |
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| Symbol | |
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| ID | 5745969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 463033 |
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| End bp | 464406 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641295495 |
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| Product | conjugal transfer protein TrbL |
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| Protein accession | YP_001561463 |
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| Protein GI | 160895881 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3846] Type IV secretory pathway, TrbL components |
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| TIGRFAM ID | [TIGR02783] P-type conjugative transfer protein TrbL |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.8375 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACG TAACGATCAT CGACCGCTTC CTCGATACCT TCTCGCGCTA CATCGACTCG
GGCTTTGGAC TGCTGCATGG CGAGGTGGCG TTTCTGACCG CCACGCTGAT CGTCATCGAC
ATGACGATCG CCGGGCTGTT CTGGGCGATG GGCCATGCCG TCGGCCAGGG CGAGGACGTG
ATCGCCAAGC TGATCCGCAA GGTGCTGTAC GTCGGTGCCT TCGCCTACAT CATCGGCAAC
TTCAACACGC TGGCCGGCAT CCTGTTCCGC TCCTTCGCCG GGCTGGGCCT AACGGCCAGC
GGCTCGACCT TGAGCATGGA GAACTTCCTA CACCCTGGGC GGCTGGCCAA GGTCGGCATC
GACGCCGGTG CGCCGATCCT TGAGCAGATC GGCAACATGG CGGGCTTCCC CGAGGTGTTC
GTGAACATCA CGCCCATCGT CGTGATGTTC CTCGCGTGGT TGATCGTCAT CCTGTGCTTC
TTCGTGCTGG CGATCCAGCT TTTCATCACG CTGATCGAGT TCAAGCTGAC CACGCTCGCC
GGCTTCGTGC TGGTGCCGTT CGCGCTGTGG AACAAGACCG CGTTCCTCGC CGAAAAGGTG
CTGGGCAACG TGGTGTCGTC CGGCATCAAG GTGCTGGTGC TCGCCGTCAT TGTGGGCATC
GGCTCGGGGC TGTTCGCCGA GTTTCAGGTA CATCCCGCCG AGCCATCCAT CGACCACTCC
GTGGTCGTGA TGCTGGCCTC GCTGACCCTG CTGGCCTTGG GCATCTTCGG GCCAGGCATT
GCAACCGGGC TGGTGTCTGG CGGGCCGCAG CTTGGCGCGG GTGCGATGGC CGGTGCTGCG
CTGGGCGCTG CGGGCGCTGC CGTTGCCGTC GGCGCCGCAG CCACGGGCGT CGGCGGCGCG
GTAGCTGCTG GAGCGCGCAT GGCGCCCGCT GCCGCCAAGC TGGCCGGCAG CGGCGCGCGG
GCTGCCGCTG GGGCTGCCAG CAGTGCACGG TCGGCGTTCC AGGCCGGTTC CGCTTCGGCC
GGCGGCGGCC TCAAGGGTGC CGCTGCGGGC TTCGGCAATG TCGCCAAGAC AGGCGCTCAG
GCAGCCGGGC AGAAGGTGGC CGATGGCGCG CGTTCGATGA AGGAACGTGC CGCCGCAGCT
TTCCGCCAGG AAGGCACGAC TTCGGCGGGA GGCGGTACAG CCGCCGCATC GGGCGGCCCA
GCGTCTGGTG GTGATACGCC CTCCACCGCG CCGCAGGAGC AACCCGCCTG GGCCAAACGC
CTGCATCGCC GCCAGCAACT CACCCATGCC GCAACCACCG CCGCCCACAC GCTGCGCGGG
GGCGACGGCG GCAGTTCCAG CCAGGGGCCG AGTCTGCGCG ATTCCGATTC CTGA
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| Protein sequence | MNDVTIIDRF LDTFSRYIDS GFGLLHGEVA FLTATLIVID MTIAGLFWAM GHAVGQGEDV
IAKLIRKVLY VGAFAYIIGN FNTLAGILFR SFAGLGLTAS GSTLSMENFL HPGRLAKVGI
DAGAPILEQI GNMAGFPEVF VNITPIVVMF LAWLIVILCF FVLAIQLFIT LIEFKLTTLA
GFVLVPFALW NKTAFLAEKV LGNVVSSGIK VLVLAVIVGI GSGLFAEFQV HPAEPSIDHS
VVVMLASLTL LALGIFGPGI ATGLVSGGPQ LGAGAMAGAA LGAAGAAVAV GAAATGVGGA
VAAGARMAPA AAKLAGSGAR AAAGAASSAR SAFQAGSASA GGGLKGAAAG FGNVAKTGAQ
AAGQKVADGA RSMKERAAAA FRQEGTTSAG GGTAAASGGP ASGGDTPSTA PQEQPAWAKR
LHRRQQLTHA ATTAAHTLRG GDGGSSSQGP SLRDSDS
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