Gene Daci_0358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0358 
Symbol 
ID5745895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp399915 
End bp400673 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content67% 
IMG OID641295421 
ProductABC transporter related 
Protein accessionYP_001561389 
Protein GI160895807 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCG ACAAGCTGGC ACGGGGCATG CCCTACATCG TGGCCGAGAA GGTCACCAAG 
TCCTTCGGCA GCCACCAGGT GCTCAAGGGC GTTTCCACGC AGTTCTGCAC GGGCGAGGTG
ACGGTGATCA TCGGCGCCTC GGGCTCGGGC AAGTCCACGC TGCTGCGCGC CATCAACCGG
CTGGAGCCGC ACGACGGCGG GCGCATCACC ATCGACGGCG TCGAAGTCAC CGACAACGAA
GCCACGCTGC AAAAGCAGCG CTGCGAAGTG GGCATGGTGT TCCAGCAGTT CAATCTGTTC
GGCCACATGA CGGTGCTGGA CAACGTGACC CTGGCGCCGC GCCGCATCCA CAAAACGCCG
CGCGCCCAGG CCAATGCCAA GGCCATGGCC CTGCTGGAGC GCGTGGGCAT GCAGGCCCAT
GCCCACAAGT ACCCGTGGCA GCTGTCGGGC GGCCAGCAGC AGCGCGTGGC CATTGCCCGC
GCCCTGGCCA TGGAGCCGCA GGTGATGCTG TTCGACGAGC CCACCAGCGC GCTGGACCCG
GAGATGGTGC AGGAAGTGCT GGACGTGATG CGCGAGCTGG CACGCGGCGG CATGACCATG
ATCGTGGTCA CCCACGAAAT GGGCTTCGCC CGCGAAGTCG CCGACCGCGT GATGTTCTTC
GACCAGGGCT GCATCGCCCA CGAGGCCCCA CCGGCCGAGT TCTTCGGCAA CCCGGCCAGC
GAGCGGATCG CGGCGTTCAT CGGGCGCATG GGGCATTGA
 
Protein sequence
MSADKLARGM PYIVAEKVTK SFGSHQVLKG VSTQFCTGEV TVIIGASGSG KSTLLRAINR 
LEPHDGGRIT IDGVEVTDNE ATLQKQRCEV GMVFQQFNLF GHMTVLDNVT LAPRRIHKTP
RAQANAKAMA LLERVGMQAH AHKYPWQLSG GQQQRVAIAR ALAMEPQVML FDEPTSALDP
EMVQEVLDVM RELARGGMTM IVVTHEMGFA REVADRVMFF DQGCIAHEAP PAEFFGNPAS
ERIAAFIGRM GH