Gene Daci_0328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0328 
Symbol 
ID5745865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp367878 
End bp368636 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content70% 
IMG OID641295391 
Producttwo component transcriptional regulator 
Protein accessionYP_001561359 
Protein GI160895777 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACAC TGCCCTCCAT GAGTACGCAC CATCTTCTGA TGATCGAAGA CGACACCCGC 
CTCGCGCAGA TGGTGGGTGA CTACCTGGGC AACAACGGCC TGCAGGTCAC GCACATGGGC
GATGCCCGCA GCGGCCTGGA GCAGCTGCAG CCCGCCGACG GTGTGCCGGG CGCCGACCTG
CCCGACCTCG TCATCCTCGA CCTCATGCTG CCCGACATGG ACGGCCTGGA GGTCTGCCGG
CGCATCCGCG CCCTGCCCGG CCCCGCAGCC CAGGTGCCGG TACTGATGCT CACGGCCAAG
GGCGATCCCA TGGACCGCAT CATCGGCCTG GAGATCGGCG CCGACGACTA CCTGCCCAAG
CCCTTCGAGC CGCGCGAGCT GCTGGCGCGC ATCCGCGCCA TCCTGCGCCG GCGCGGCGGC
GGCGAGGGCA CAGCCAACGC CCAGGTGACC ACGGCGCTGC GCTTCGGCAG CCTGGAGATC
GACCGCGACG CGCGCAGCGT CACCGTGGCG GGCCAGCCCT GCGAGCTGAC CTCCTACCAG
TTCGACCTGC TGGTCACGCT GGCCGAGCGC GCGGGCCGCG TGCTCACGCG CGACCAGATC
ATGGAGGCCG TGCGAGGCCG CGAGCTGGAG GCCTTCGACC GCTCCATCGA CGTGCACATG
GGCCGCATCC GCGCCGCAAT CGAGGCCGAC CCCAAGGCGC CCAAGCGCAT CCTGACCGTG
CGCGGCGTGG GCTACGTCTT CGCCAAGCAA CAAGACTGA
 
Protein sequence
MNTLPSMSTH HLLMIEDDTR LAQMVGDYLG NNGLQVTHMG DARSGLEQLQ PADGVPGADL 
PDLVILDLML PDMDGLEVCR RIRALPGPAA QVPVLMLTAK GDPMDRIIGL EIGADDYLPK
PFEPRELLAR IRAILRRRGG GEGTANAQVT TALRFGSLEI DRDARSVTVA GQPCELTSYQ
FDLLVTLAER AGRVLTRDQI MEAVRGRELE AFDRSIDVHM GRIRAAIEAD PKAPKRILTV
RGVGYVFAKQ QD