Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_0017 |
Symbol | |
ID | 5745553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 18230 |
End bp | 19651 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641295080 |
Product | outer membrane efflux protein |
Protein accession | YP_001561049 |
Protein GI | 160895467 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGA GTGATAGCCC CCTGAGCGGC TTCGCCGCTT CCCCCTCTCG CTTCGCGGGG GGGACGACGC CCTCGCCGCG AGGCGGCTCT TGCTCGGCGT CCCTGGCTTT TGGTCGCGCC GGTTTTGCAG GCAGCGCCCG TTATCGGGCC CTGTTTGTGG CTGTGGCGCT GTGCTGCGGG GCGGGTTCTG CGCTTGCGCA GCAGGCTGTG CCCGCTGTGC CGGCCATCAC TGCGGCGCCT GCCTCCGAGG TGGCTCCGGC GGCTGCGCCG CAGCAGCCGG TGGGGATGCA GGAGTATCTG CAGATGGTGG TGCGCAATCA GCCCCAGCTG GCGGCGCAGC GGCTGCAGAT CGGGATTGCG CAGGCGGACA GCCGCACGGC GGCGGCGTTT CCCAATCCCA CGGCGTCGTA CAGCAGCAAG CCGGGCGAGA AGCAGTGGGG CATCGAGCAG CCGCTGCCCA TCTTCGGCCA GCGGCGTTTG CGCATGGAGA ACGCGCGCAA GGGCGAGACG GCGGCGCGTG CCAATGTCGA GGTGGCCGTG GCCACCACGC TCAACGATGC AGCCACGGCC TTCATCGACC TGCTGATGAC GCAGCAGCGC CTGAAGGTCT GGGAAGAGGC GCAGGAGGCG CTGAACGGCG CAGGCAATAT CGTGCGCGGC CAGATCGAGG CCGGCGCGCG CAGCCGCTAT GACGGCGCAC GCCTGAGCCT GCAGCAGGCC CAGATGGCCA TGCAGGTCAG CCAGGCCCAG TCGGACTGGC AGGACGCCGC CTCGCACGCC GCCGCCCTGG CCGCCCTGCC CCAATGGGCG CCGCGCGCCA CAGGCAGCCT GCAGGCCGTG CCCGTGGGCC AGCTGCTCAA CGAGCAAGAG CTGTGGGAAG CTGCGCGCCA GCGCCTGCCG GTCCTGGTCG CTGCCCAGGC CGAGCTGGAC CAGTTGCGCC ACAAGGTCGA GCTGGAACGC CGCGAAGCCC TGCCCACGCC CAGCGTGAGC GTGGCGCGCG TGCGCAACCG GCTTGACGGC AACTACAACC AGATCGGCGT GTCGGTGGAG CTGCCGCTGT TCGACCGCCG CGAAGGCCCC ATCGCCCGAG CCCAGGTCGA GGCCGAACAG GCCCAGCTGC GCTACGACGC CGCGCTGATC GAGGCGCGCA CCGAGCTGCA GCGCGCCATC AAGCAACTGA AGCTGCGCCG CGATGCCGTG CGCGCCTACG AAAAGCAGGG CCTGGCCCAG ATCGCGCCGC TCAACCAGAT GGCCCAGGAC GCCTACAAGC TGGGCCAGGG CTCCATCCTG GAGCTGATCG ATTCGCTGGG ATCGATCAAC GAGCACCGCC TGGAGCACCT GGACCTGGTC AAGGAAATGA TGCTGGCCGA GTGGCAGGTG CGCGTGGCCA GCGGCGATCT GCCGATGTGG GCAGCGCCCT GA
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Protein sequence | MKKSDSPLSG FAASPSRFAG GTTPSPRGGS CSASLAFGRA GFAGSARYRA LFVAVALCCG AGSALAQQAV PAVPAITAAP ASEVAPAAAP QQPVGMQEYL QMVVRNQPQL AAQRLQIGIA QADSRTAAAF PNPTASYSSK PGEKQWGIEQ PLPIFGQRRL RMENARKGET AARANVEVAV ATTLNDAATA FIDLLMTQQR LKVWEEAQEA LNGAGNIVRG QIEAGARSRY DGARLSLQQA QMAMQVSQAQ SDWQDAASHA AALAALPQWA PRATGSLQAV PVGQLLNEQE LWEAARQRLP VLVAAQAELD QLRHKVELER REALPTPSVS VARVRNRLDG NYNQIGVSVE LPLFDRREGP IARAQVEAEQ AQLRYDAALI EARTELQRAI KQLKLRRDAV RAYEKQGLAQ IAPLNQMAQD AYKLGQGSIL ELIDSLGSIN EHRLEHLDLV KEMMLAEWQV RVASGDLPMW AAP
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