Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET1137 |
Symbol | |
ID | 3229524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | + |
Start bp | 1040057 |
End bp | 1040878 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637120701 |
Product | radical SAM domain-containing protein |
Protein accession | YP_181852 |
Protein GI | 57234058 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1180] Pyruvate-formate lyase-activating enzyme |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.558403 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTGCAA ATTCTCATAC CCCGCGCATT ATGCCTGACC GCCAAGCCAA CCCGGATATG ACAAATGTCT ATCATATAGC TTATGCACCG GGTATTAAAA AAGCGTATCT GTTTCACTGG AATTGCAATC TAAAATGCCG CGGCTGTCTT TGTAAAAAGG AAATCAACTG CCTGGCTCTG GAAGAAAATC TGGATGTAGT TGCCCGTGAC CCTCATCTAG CCCCGCCCCG TGGTCCTGAA TCGTTCCTTA GCCTGAACGG AATTATGGAA ACACTGCGCA AAGTGGAGCT CAAAGAGGTT CTGTTTGAAG GTCAGGAAGC CACCATAGAC CCCCATTTTG CCGAAATATG CCGCCGTCTC AAAGCTGAGT TTGGTGTTTA TATAACCTTA AATACCAACG GGCTGAAACT ACCTGACCTT TCCAACGTAG ATGAAGTAGT TTTCAGCCTG AAGGCAGTTA CCCCGGAACT CTATCTGGAC TATACCGAAG TACCCAATAC CAGAATGCTG GAAAATTTTG AAAATATTTT CCGTTCAGGC AAGAAACTGC GGGCTGAAAT GGTATTTATC CCCGGCTATA TAGATATAGC TGAAACAGAG GTCATTGCCA AACATATTGC CAGTCTCAGC CGGGATATTC CCCTCAGGAT AGACGCCTAT TTTGAATGCG GTGATAATAC CTGGCGGAGA GCCACCCCGG AAGAAATGCG TCAGGCAGTA GCTGCGGCCA AAAAACACCT TAATACCGTG ACCTGCACCC AGCAAACTAC CGACAATCTG GATAAAAAAG ACCTTTTCTT TGAGGTAAAA CGGCTATTCT AA
|
Protein sequence | MTANSHTPRI MPDRQANPDM TNVYHIAYAP GIKKAYLFHW NCNLKCRGCL CKKEINCLAL EENLDVVARD PHLAPPRGPE SFLSLNGIME TLRKVELKEV LFEGQEATID PHFAEICRRL KAEFGVYITL NTNGLKLPDL SNVDEVVFSL KAVTPELYLD YTEVPNTRML ENFENIFRSG KKLRAEMVFI PGYIDIAETE VIAKHIASLS RDIPLRIDAY FECGDNTWRR ATPEEMRQAV AAAKKHLNTV TCTQQTTDNL DKKDLFFEVK RLF
|
| |