Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET0489 |
Symbol | rplF |
ID | 3230241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | + |
Start bp | 452483 |
End bp | 453031 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637120055 |
Product | 50S ribosomal protein L6 |
Protein accession | YP_181233 |
Protein GI | 57234772 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0097] Ribosomal protein L6P/L9E |
TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000497907 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTAGAA TAGGTAAAAT GCCGATAAAG GTTCCACCCG GCGTAACGGT GGACATAAAA GGGAATGATG TAACTGTTAA AGGGCCTAAA GGCACTCTTA ACAGGACCTT CAGACCGGAA GTAACCATTA CCCGTGACGG GGATTATCTG GTTGTCGCTC CGGTAGGTAC AGACAAGGCC GCCAGGTCTT TCTTCGGCCT TAGCCGTACC CTTTTGGATA ATATGATTGT GGGTGTCAAA GACGGCTTTG ACAAGAACCT TGAAATAGTG GGCGTGGGTA TGCGTGCTGA CAAAGATGGC AACAATATCA TCTTTAAAGT AGGTTATTCG CACACTGTTA CGGTAGCCCC TCCGGCGGGC ATCACTTTGA GTGTAGACGG TACCACCAAA GTCAAGGTAT CCGGTATAAA TAAAGAAGAA GTGAGCCAGA TGGCTGCTGA AATCAGGTCT ATCAGAAAGC CTGACCATTA TATGGGCAAG GGTATCAGAT ATGCCGGTGA ATATGTACGC ATCAAGCCCG GCAAGGCTAT CGGAAAGGGT GCTAAGTAA
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Protein sequence | MSRIGKMPIK VPPGVTVDIK GNDVTVKGPK GTLNRTFRPE VTITRDGDYL VVAPVGTDKA ARSFFGLSRT LLDNMIVGVK DGFDKNLEIV GVGMRADKDG NNIIFKVGYS HTVTVAPPAG ITLSVDGTTK VKVSGINKEE VSQMAAEIRS IRKPDHYMGK GIRYAGEYVR IKPGKAIGKG AK
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