Gene DET0479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0479 
SymbolrplV 
ID3230150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp448498 
End bp448827 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content46% 
IMG OID637120045 
Product50S ribosomal protein L22 
Protein accessionYP_181223 
Protein GI57234681 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0091] Ribosomal protein L22 
TIGRFAM ID[TIGR01044] ribosomal protein L22, bacterial type 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.867653 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGTAA AAGCAATAGT AAAGGACACG GGATATTCAG CGCTCAAGGT AAGGCTGTGC 
GTTGATATGG TTCGCGGCAA GAAAGTAAGT GAAGCTATTA CCATGCTTCG CTTTATGACC
TCGCCTACGG CCAAGGTTGT ATCCAAGGTT ATAAAATCAG CCGCGGCTAA TGCGGAAAAT
AATTTCCAGA TGAATCCGGC TGACTTAAAA ATATCACAGA TTTATGCAGA TGAAGCGCGA
ATGCTTAAGC GGATGCGTCC TCAGGCCAGA GGCCGGGTTT CGCCAATATT AAAGCGCTCC
AGCCATATAA CTGTTGTCGT GGCTGACTAG
 
Protein sequence
MEVKAIVKDT GYSALKVRLC VDMVRGKKVS EAITMLRFMT SPTAKVVSKV IKSAAANAEN 
NFQMNPADLK ISQIYADEAR MLKRMRPQAR GRVSPILKRS SHITVVVAD