| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0200 |
|---|
| Symbol | |
|---|
| ID | 3230497 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides ethenogenes 195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002936 |
|---|
| Strand | + |
|---|
| Start bp | 192371 |
|---|
| End bp | 193282 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637119767 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_180948 |
|---|
| Protein GI | 57235027 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4743] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000745264 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTTT TACGCCGGTA TGATTTTTAT CTGCTGATAC TGTTTATAGG GTTAGGTGTG
CTGGCCTTTA ACGGTGGCTG GGTACTGCCT TTGCGGCTGT TATTTGGCCT GCCGCTGGTC
CTGATAGTGC CGGGTTATGC CCTGGCATCA GTCCTGTACC CCTCTAAGCT TAGCCTCAGC
CGCTCATCAC GGCTTATGGT GAGTTTGGCA CTCAGTCTGT CAGTCTCCAT GCTGGCCGGG
CTGGTTTTAA ACTATACGGC CGGGCTAAAT CAGGAAAGTG TTTTCTATAC GCTTGGCGGC
TTCAGCCTTG TTTTCTGTCT GGCGGCTATT GCCCGAAGGC AGCACCTGCC GCCAGATGAA
AAGCCCGGCC TGATACTGGT TCCGCCTGAT ACCAAAAAAC AAACGCCGAA AAGCACCGCC
CAGGTCTTTT TAAATGTGCT TCTGGCGGTT TGCCTGCTGG GGGCGGGGGG CTTTGCCGTT
CAGCGTCTGG TTCAAGCTTA TTCACCGGCT GAGTTTACCC AGTTTTATCT GCTGGGAATA
GATGATACCG CCGAAAATTT TCCGGAGCTG TTTATTCTAA GTAACGGGCA GGTGTCCGCT
GTTAAGTATG GCAACCAGCC TGCTGTGGAA GCTGACTTAG CCCGCCTTAA ACTGGTCATC
TCCAATAACG GCCAGTCAGG TACACTCTAC CGGGTGGAGG CCTTTATTAA CGGGCAACTG
TATATATTTT CCCTGGCAGA CGGCGGGGAA TTTGATGGTT TGGTGGATGT GGCGGCGGGT
GCGGCCGAAT CACTTGAGCT TTATTTTGCC CCGCCCGAAG CCGGAGATAA CCAGATACTG
GAAATCTGGC TTTATGCGGG TGAAGAAGCT GTTTTTTCTC AGCCGCTAAA GCTGGTGTTC
AGTGCGGCTT AG
|
|---|
| Protein sequence | MNFLRRYDFY LLILFIGLGV LAFNGGWVLP LRLLFGLPLV LIVPGYALAS VLYPSKLSLS
RSSRLMVSLA LSLSVSMLAG LVLNYTAGLN QESVFYTLGG FSLVFCLAAI ARRQHLPPDE
KPGLILVPPD TKKQTPKSTA QVFLNVLLAV CLLGAGGFAV QRLVQAYSPA EFTQFYLLGI
DDTAENFPEL FILSNGQVSA VKYGNQPAVE ADLARLKLVI SNNGQSGTLY RVEAFINGQL
YIFSLADGGE FDGLVDVAAG AAESLELYFA PPEAGDNQIL EIWLYAGEEA VFSQPLKLVF
SAA
|
|---|
| |