| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0142 |
|---|
| Symbol | phoU |
|---|
| ID | 3230486 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides ethenogenes 195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002936 |
|---|
| Strand | + |
|---|
| Start bp | 139394 |
|---|
| End bp | 140059 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637119710 |
|---|
| Product | phosphate transport system regulatory protein PhoU |
|---|
| Protein accession | YP_180892 |
|---|
| Protein GI | 57235016 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0704] Phosphate uptake regulator |
|---|
| TIGRFAM ID | [TIGR02135] phosphate transport system regulatory protein PhoU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCGAA TGGGATTTGA CCGCCACCTT AGGGAACTTG AGGATGATAT GCTCCTTTTG
GGTAGCATGG TAGGCAAGGC TGTTGACCGC TCTATGCAGT CTATGAAAGA GCGGGATTTG
GAGCTGGCCA AACAGGTTAT AGAAGAAGAC AAACTTATTA ACCAAAAACG CTTTGAGATA
GAAGAAAAAA GCGTAGAGCT TATGGCTACC CAGCAGCCGA TGGCCCGCGA CTTAAGGATA
ATAGTAGCTG TACTTAACAT AATAGTTGAC CTTGAAAGAA TTGGCGACCA TGCCGAAGGT
AATGCTAAAA TAGCCCTGAT GCTGGGTGAA GAGCCGCCTT TAAAGCCGCT CATTGACCTG
CCCCGCATGG CCTCCAAAAC AGAGGAAATG CTAAACCGGG CGCTGGGGGC TTTTGTCCGG
CGTGATTCCG CCGAAGCTTT GCGGGTAATA GACGAAGATG ACGAAGTAGA CGGCCTGTAT
AACCAGATTT TCCGGGAACT GCTGGTTTTT ATGGCCGAAG ACCCCCATAC TATCTCCCGG
GCAACCCGCC TTATCTGGGC AGCCCATAAT CTGGAAAGGA GTGCGGACCG GGTTACCAAT
ATTTGCGAAA GGGTACTCTT TGTGATTACT GGTAAATCTG AAGAGTTTGG TTCATCAAAG
TACTAA
|
|---|
| Protein sequence | MPRMGFDRHL RELEDDMLLL GSMVGKAVDR SMQSMKERDL ELAKQVIEED KLINQKRFEI
EEKSVELMAT QQPMARDLRI IVAVLNIIVD LERIGDHAEG NAKIALMLGE EPPLKPLIDL
PRMASKTEEM LNRALGAFVR RDSAEALRVI DEDDEVDGLY NQIFRELLVF MAEDPHTISR
ATRLIWAAHN LERSADRVTN ICERVLFVIT GKSEEFGSSK Y
|
|---|
| |