Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_3701 |
Symbol | |
ID | 8393044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | - |
Start bp | 3777682 |
End bp | 3779874 |
Gene Length | 2193 bp |
Protein Length | 730 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644981627 |
Product | Lytic transglycosylase catalytic |
Protein accession | YP_003139348 |
Protein GI | 257061460 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.236251 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.218254 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAAGC CACTCAAAAA CAAAAGCTCT CTCCTAGTCG GTTCAGGACT GCTAGGACTC GCATTGATTG GGACAATTCC CCTTGCTCCC AAAGCGATAG ACTGGATGGA GCAAAGGCAA CAAGCTCAAA TTGAAAAGGC ATTGCAAGAA GACGGCAATA AACCCTCGGT GGTGCTAACT TTAGCGGAAA TTCCCTCAGA ACAAAGACGG CAAAAACTCG AAGAGATAGC TGCCTCTGAT ACCCTATCTT TAGAACGGAG TCGTGCTCGC TATTTATTAG CAGTGGATTT GCTCAAAAAA TACGAGGGAG GCCCCGCTTT ACGACAACTT GAAGGGCTAG AAAAGGAATA TCCTGTATTA GCCCCTCTGA TTCTTCTCAA AAGGGGTCGA GGCTATGAAT TAACCAATGA AAAAGCTAAA GCTCAAGAAA CTTGGCAAGA ATTGGTGAAA ACCTATCCTG ATTCCTTAAT TGCGGCTGAA GCTTTAGTTA AACTAGGACA ATCTGATTCT AGTCATTGGG ATGAAGCGAT CGCTAAATTT CCTCAACATC CGGGCACTCA AGAAATTATT AGGGAACGTC TTAAAAAAAA TCCACAACAG CCTGAGTTAT TGCTGTTGTT GGCAAAGTAT GACAAAAATA ACCCTGCTAC CAATCCAATG CGCGATCGCT TGGTTAAAGA TTACGCCAGT CAGTTAACGC CTGAAGATTG GCAAGCGATC GCGGACGGTT ATTGGGCAGT AGAAGATTAT TATAAAGCCG CCCTAGCCTA TCAAAAAGCT CCTAGTACGG CACAAAACCT TTACCGCATC GGCAGAGGGC AACAGCTTCA ACCCAACGGC AACAATAAAG CTACGGTGCA AGCAGCCTAT CAAAAACTAT TGGTAGCCTT TCCCCAAGCA CCAGAAGCGG CTTTAGCCTT GCAGCGACTC GCCCAATTAT CTCAACCGGA AACTGCCATT AGCTACCTCG ATCAACTGAT CAATAAATTC CCTGAGCAAG CGGGGTATGC GCTGGTGAAA AAGGCTGAAT TACTTGATAA ATTGAACCGA CAAGGGGAAG CAACGAAAAT TCGCCAAACT TTATTGTCTA AATATGCTAA ATCCGATGCG ACGGCTGAAT ATCGTTGGTT GATTGCTCAA AAAGCGGCTG AACGGGGAGA TGCTCTAAAA GCTTGGACGT GGGCACAACC GATTGTTGTT AATAACCCAG AGAGTCCTTT AGCCCCGAAA GCAGGGTTTT GGGTGGGGAA ATGGGCGCAA CAGCTAGGAC GACTCGAAGA AGCAGAAACA GCTTTTGAGT ATGTGGTGAC TCGTCATCCC CAATCTTATT ATGCTTGGCG ATCGGCAGTA CAATTAGGCT GGAATGTAGG GAATTTTAAT ACGATCCGTC AAACCTTACC CCAAGTGGCG AAACCGACTA CCCGTTCGCT ACCACCGGCC GGTTCAGCTA TGTTTCAGGA ACTGTATCGT TTAGGACAAG ATAGGGAAGC AATTACATTA TTTCAAGCTG AAATGAGCGA TCGCGCTGAA CTTGATGTTA ATGAGTCCTT TACCGATGCG TTATTGAAAT TGGTACAAGG AAAAAATCTG GTGGGAATTA ATCAAGTTTG GGATCTCAAG AAAAAAGAAG AACTTGAGTC ACAAGAACAG TGGCAAAAAC TCAGAGAAAC GCCCGAATAT TGGCACGCTT TATTCCCGTT TCCTTTCTAT CAAACGATCA TGGATTGGTC ACAAAAACGA CAATTAAATC CTTTATTAGT TACGTCTTTG ATTCGTCAAG AATCGCGTTT TGAACCAGAA ATTGCTTCTC CAGTGGGTGC TAAGGGATTA ATGCAGGTGA TGCCAGCAAC TGGGGAGTGG GTAGCTAACA AAATTCAACT GAAAAATTAT TCTTTAAGTA ATCCTAATGA TAATGTGAAT TTGGGAACGT GGTATTTGAA TCATACCCAT GATACCTACA GTAATAATTC TTTATTAGCG GTTGCTAGTT ATAATGCCGG TCCAGGAAAT GTATCTAAAT GGGTTAAACG ATATCAAACG AGTGATCCTG ATGTTTTTGT TGAGAAAATC CCTTTTAAAG AAACGAAAGG GTATGTAGAA TCTGTGTTTG GTAATTATTG GAATTATCTG CGGATTTATA ACCCGGATAT TGCCCAATTA TTAGCGCAAA AGAATCAGCA AACGCCAAAG TAA
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Protein sequence | MLKPLKNKSS LLVGSGLLGL ALIGTIPLAP KAIDWMEQRQ QAQIEKALQE DGNKPSVVLT LAEIPSEQRR QKLEEIAASD TLSLERSRAR YLLAVDLLKK YEGGPALRQL EGLEKEYPVL APLILLKRGR GYELTNEKAK AQETWQELVK TYPDSLIAAE ALVKLGQSDS SHWDEAIAKF PQHPGTQEII RERLKKNPQQ PELLLLLAKY DKNNPATNPM RDRLVKDYAS QLTPEDWQAI ADGYWAVEDY YKAALAYQKA PSTAQNLYRI GRGQQLQPNG NNKATVQAAY QKLLVAFPQA PEAALALQRL AQLSQPETAI SYLDQLINKF PEQAGYALVK KAELLDKLNR QGEATKIRQT LLSKYAKSDA TAEYRWLIAQ KAAERGDALK AWTWAQPIVV NNPESPLAPK AGFWVGKWAQ QLGRLEEAET AFEYVVTRHP QSYYAWRSAV QLGWNVGNFN TIRQTLPQVA KPTTRSLPPA GSAMFQELYR LGQDREAITL FQAEMSDRAE LDVNESFTDA LLKLVQGKNL VGINQVWDLK KKEELESQEQ WQKLRETPEY WHALFPFPFY QTIMDWSQKR QLNPLLVTSL IRQESRFEPE IASPVGAKGL MQVMPATGEW VANKIQLKNY SLSNPNDNVN LGTWYLNHTH DTYSNNSLLA VASYNAGPGN VSKWVKRYQT SDPDVFVEKI PFKETKGYVE SVFGNYWNYL RIYNPDIAQL LAQKNQQTPK
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