Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_3231 |
Symbol | |
ID | 8392567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | - |
Start bp | 3305957 |
End bp | 3307594 |
Gene Length | 1638 bp |
Protein Length | 545 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 644981178 |
Product | MscS Mechanosensitive ion channel |
Protein accession | YP_003138904 |
Protein GI | 257061016 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3264] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.371413 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAG TTATTCAACC CTTTATACTC TGGTTACTGG TTGGTTTGTT GGCAGTGACA GCAATTCCTA TAGTCATAGC ACAGTCTACA CCATCAAGCA CAGATTCAGG CAAAGCCCCT GTTACGCTTG ATGGGGAAAC TCTATTTGTC TTTACCAAAC CCCTAGGAAC GATTTCTGTT GAGGAACGTG CCAAAAATGC TAGCCGTAGA TTACAGCAGT TTGCAGACAG TGAAACGCTA TCAGTTGATG ATATGAATAT TGACATAGGC GATACAGAAG GTGTTGGTAT TCCGATTACG GCTGTTTCTG TAGGAAATAT TCCCCTAATT ACCATTACTA AACAGGATGC CCTTGCTGCA ACCAAATCCC GTTCAGTGTT GGTTAAAGAA TATGTAGCAA TTATTAAAGA TGCTGTGACT CGTTATCGGG AAAAACGGAC TTTTCAAAAT ACAATTAGAT CTTTAATTTT TGCGATTATT GCTACGATTA TTTCCTTGGT TATTTTATTT ATTATTCACA ATATTTTTGC CAAAATTAAT CAAAAACTAG ACCTCTGGGG AACGACCTAT ATTCAACCCG TTCGGATTGG CACTTTTGAA TTGATTAAGG CAAATCAATT AGATAATGTT GTTCATTTTA TTGCTCGAAT TATTCAGATA ATCGCTATTT TAGGCTTGGT GGTTGCTTAT TGTATTTTTG TCTTGAGTCA ATTTATCTGG ACAAGAAGTT TAGCTGCTAC CTTTGTCGAT TATCTTTCTA AAACTTTCCA AACTGTTTGG CAAGCTTTTA TTAACTATGT ACCTAATTTA TTAGTCATTA TTACTGTTAT TTTAATTGCT TGGTTTTTCT TGCGGGTATC TAAAACCCTT TTTGATGAAT TGAGGCAAGA AAATATTTCT TTACCTGGGT TTTATCCTGA GTGGGCGTTA CCGACTTATC GCTTAGTAAC TACGGGAATT GTTGTTTTAG CGGCGATTAT TATTGTTCCT TTATTACCCG GATTTAATTC TCCAGCCTTT CAAGGAATTT CAGTCTTTTT AGGTTTGCTA TTTTCTTTGG GTTCAACTTC AGTCATTGCC AATGTAGTCT CAGGAACAAT TCTAATTTAT ACTCGTGCTT TTCGGGTTGG AGACTATATT ACGATTGGAG ACACTACCGG ACAAGTTCTA GAAACAACTT TGCTAGTAAC GCGAATTTTA ACTGTTACCA ATGTGGTGAT TAGTATTCCT AATTCAGAAA TTATTACTAC TTCTATTTCT AATTGGAGCT TTTCTTCAAA AGAGTTAAAT TTGCCTTTAA TTGTGCGAAC TCCTGTCTAT TTAGGTTATG AAGTTCCTTG GAAACAAGCC TATAATGCCC TGATTCAAGC GGCTGTTCAA ACTAAGGGGA TTTCTCAGTC TCCCCCACCG TTTGTCATTC AAGAAGCCCT CAATGAAGTC TATGTTACCT ACCAATTAAG TGTTTATGTT AATTGGGAAT ATTTCAAAGG AAAAAGTCTC AAAGAATTTG AACAAACTCG CTCAAAATTA CACGAAAATA TTCGAGAGTG TTGTCAAGAA GCCGGGATTC GCATTTTTGC CCCTAGTTAT GAAGCCGATC CAACTAATTA TGGACCAGCA GCCGTTAATG AGGAATAA
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Protein sequence | MKKVIQPFIL WLLVGLLAVT AIPIVIAQST PSSTDSGKAP VTLDGETLFV FTKPLGTISV EERAKNASRR LQQFADSETL SVDDMNIDIG DTEGVGIPIT AVSVGNIPLI TITKQDALAA TKSRSVLVKE YVAIIKDAVT RYREKRTFQN TIRSLIFAII ATIISLVILF IIHNIFAKIN QKLDLWGTTY IQPVRIGTFE LIKANQLDNV VHFIARIIQI IAILGLVVAY CIFVLSQFIW TRSLAATFVD YLSKTFQTVW QAFINYVPNL LVIITVILIA WFFLRVSKTL FDELRQENIS LPGFYPEWAL PTYRLVTTGI VVLAAIIIVP LLPGFNSPAF QGISVFLGLL FSLGSTSVIA NVVSGTILIY TRAFRVGDYI TIGDTTGQVL ETTLLVTRIL TVTNVVISIP NSEIITTSIS NWSFSSKELN LPLIVRTPVY LGYEVPWKQA YNALIQAAVQ TKGISQSPPP FVIQEALNEV YVTYQLSVYV NWEYFKGKSL KEFEQTRSKL HENIRECCQE AGIRIFAPSY EADPTNYGPA AVNEE
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