Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_2703 |
Symbol | |
ID | 8392029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | - |
Start bp | 2733088 |
End bp | 2735061 |
Gene Length | 1974 bp |
Protein Length | 657 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644980662 |
Product | glycogen debranching enzyme |
Protein accession | YP_003138398 |
Protein GI | 257060510 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3408] Glycogen debranching enzyme |
TIGRFAM ID | [TIGR01561] glycogen debranching enzyme, archaeal type, putative |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.604067 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACTTTA ACTATGGACG AGACATTTGT GGCCACTTAA CCCTTGCTTC ATCAAGAGAA TGGTTAATCA CTAATGGCAT TGGAGGCTAT GGTTGTGGGA CAATCTCTGG GATGCTAACC CGTTGTTATC ATGGGTTACT CATTGCTGCT TTAAAACCCC CCTTAAAACG AACGTTACTC CTAACAAAAC TCGATGAAAC CCTGCAATAT TGCGATCGCG TGTATCAACT CACCACCAAC CGATGGAGTG ATGGCAGTAT TTCTCCCCGT GGCTACCTTT ACTTAGAAAA TTTTTGTTTA GAAGGAACCA TTCCAGTATG GACTTTTGCC TGTGGAGATG CCTTAATTGA GAAGCGAGTT TGGATGGAAC AGGGCGCAAA TACAACCTAT ATTCAGTATC AGTTTAAACG CGGTAGTGCC TCAATCGATC TGACCCTAAA AGCCTTTTTT AATTATCGAG ATCACAATGG AACCACCCAG TCAGGAGATT GGCAAATTGC CGTAGAAGAA GTTGATCGCG GGGTTGGTAT TCAGGCCTTT CCTGAAGCAA CCCCCTTCTA TTTATTCACA GACTCAGGCG AAATTTTCCC TAATTCCCAT TGGCATTTAG CCTTTGATTT AGCCATGGAA CGCTATCGAG GATTATGGGA TAGAGACGAT CATTACCAAG GGGCTACTAT TCAGACCATT CTTAACCCTG GAGACTCCAT AACTATTATT GCCAGTACTG ATCGCTATCC TAACCACAAT GGAAAAATAG CCCTCGAAAA ACGTTATCAT TATCAACAGG AATTACTCAA AAACTATCCG TCTTCTGATC CCCCATGGAT CAAACAATTA GTCTTAGCAG CCGATCAATT TATTGTTGAT CGCCCCTTAA CCGATAACCC CGACGGCAAA ACCATCATAG CGGGATATCC TTGGTTCGCC GACTGGGGAC GGGATACCAT GATCGCCTTA CCTGGGTTAA CCTTAACAAC GGGTCGGCCG GAAATTGCCC GTCAGATCCT TAGTACCTTT GCGAAATACC TTGATGGGGG AATGTTACCC AATGTTTTCC CCGATCAGGG CGAAACCCCC CAATATAATA CAGTAGATGC CATTCTTTGG TATTTTGAAG CGATTCGTGC CTATTATACC GCCACAGAAG ATAAGGAATT AATCGCGCAA CTCTTCCCCT TGTTGCAGGA AGTCATTGAC TGGCATCGTC GCGGAACTCG TTACAATATC CATCTAGATG AAGATGGCTT AATTTATGCC GGGGAAGCGG GAAGTCAACT GACTTGGATG GATGCTAAGG TGGGGGACTG GGTGGTCACT CCGCGCCAAG GTAAACCCGT GGAGGTGAAT GCTCTATGGT ACAATGCTTT AGTGATTATG GCTTATTTTG CTGAAATTTT GCAGCAACCG ACGGCAGAAT ATCAACAAAT GGCAGAACAT ACCCATCAAG GGTTTCAACG GTTTTGGGAG CCGTCTTTGA ACTATTGCTA TGATGTATTA GATACCCCTG AAGGGGATGA TTCTTCGTTG CGACCGAATC AAATTTTTGC TGTCTCTTTA CCCAAATTTA AAACAACCAC TCCCCTGTTA AATCATCAGC AAGAAAAAGC CATTGTTGAT ATTGTGGCGA GGGAATTAGT CACTTCCTTT GGACTGCGAT CGCTATCTCC TAATCATCCC CACTATCAAG GCCATTATGG TGGCGATCAA GTGAGTCGAG ATGGTAGCTA TCATCAAGGA ATTGTCTGGG GATGGTTAAT CGGTCATTTT GTTGACTCCT ATTGGAAAGT TTATCATGAT ATTTCAGGGG CATTAAGTTT CCTTAAACCG ATGGCTAATC ATCTCGATGA TGCTTGTATT GGTAGCATTA GTGAAATTTT TGATGGCGAT CTTCCGTTAC TTCCTAGAGG CTGTTTTGCC CAAGCTTGGA GTGTCTCAGA AGTGCTCCGA GTTTGGCGAG AAATCAGTCA ATAG
|
Protein sequence | MNFNYGRDIC GHLTLASSRE WLITNGIGGY GCGTISGMLT RCYHGLLIAA LKPPLKRTLL LTKLDETLQY CDRVYQLTTN RWSDGSISPR GYLYLENFCL EGTIPVWTFA CGDALIEKRV WMEQGANTTY IQYQFKRGSA SIDLTLKAFF NYRDHNGTTQ SGDWQIAVEE VDRGVGIQAF PEATPFYLFT DSGEIFPNSH WHLAFDLAME RYRGLWDRDD HYQGATIQTI LNPGDSITII ASTDRYPNHN GKIALEKRYH YQQELLKNYP SSDPPWIKQL VLAADQFIVD RPLTDNPDGK TIIAGYPWFA DWGRDTMIAL PGLTLTTGRP EIARQILSTF AKYLDGGMLP NVFPDQGETP QYNTVDAILW YFEAIRAYYT ATEDKELIAQ LFPLLQEVID WHRRGTRYNI HLDEDGLIYA GEAGSQLTWM DAKVGDWVVT PRQGKPVEVN ALWYNALVIM AYFAEILQQP TAEYQQMAEH THQGFQRFWE PSLNYCYDVL DTPEGDDSSL RPNQIFAVSL PKFKTTTPLL NHQQEKAIVD IVARELVTSF GLRSLSPNHP HYQGHYGGDQ VSRDGSYHQG IVWGWLIGHF VDSYWKVYHD ISGALSFLKP MANHLDDACI GSISEIFDGD LPLLPRGCFA QAWSVSEVLR VWREISQ
|
| |