| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_1491 |
|---|
| Symbol | |
|---|
| ID | 8390803 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | - |
|---|
| Start bp | 1529054 |
|---|
| End bp | 1532734 |
|---|
| Gene Length | 3681 bp |
|---|
| Protein Length | 1226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 644979492 |
|---|
| Product | chromosome segregation protein SMC |
|---|
| Protein accession | YP_003137242 |
|---|
| Protein GI | 257059354 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG1196] Chromosome segregation ATPases |
|---|
| TIGRFAM ID | [TIGR02169] chromosome segregation protein SMC, primarily archaeal type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTCATA TCAAGCGCAT CGAACTTTCG CACTTCAAAT CTTTTGGAGG AACCACCTCC
ATTCCATTTT TGACGGGGTT TACGGTGGTA TCAGGTCCCA ATGGGTCAGG TAAATCTAAT
ATTCTCGATG CGCTATTATT TTGTTTGGGA CTGGCTACTT CAAAAGGAAT GCGTGCTGAA
CGTCTTCCAG ACTTAGTCAA CCACAATCAT AGCAACAACC GCAAGACCCA AGAAGCGAGT
GTATCTGTTA CCTTCGATGT TTCTGACTTA GAAGACTTAC AAGAATTTAG TCCTAACAGT
CCCCCCGTGA CACAGGTAAC AGTCGTTGAA GATAATCATA GCAATGGTCA TCACCTCCCT
GACGCAGAAG AAACTCCCAT CGACAATAAA AAGTTAGTTC GTAACAGCGA ATGGACTGTA
ACAAGACGGT TACGGGTGAC GAAAGGGGGA AGTTATTCCT CGAATTACTA TATCAACGGG
GAAGCGTGTA ATGTTAATGA ACTCCACGAA CAATTAAACC GTTTACGCAT CTATCCCGAA
GGTTACAATG TTGTCTTACA AGGGGATGTA ACTCGCATTA TCTCCATGAA CTCCAAGGAA
AGACGACAAA TTATTGATGA ATTAGCAGGA GTTGCTGAAT TTGATCGCAA AATTGAAAAG
ACAAAAGAAA CCTTAGAAGA AGTCAGAGAA AGAGAAGAAA GATGTCAAAT TATTCAAACG
GAATTACAGC GATCGCTAGA AAGATTAGCA TCTGATCGTA TTAAAGCAGA AAAGTATCAA
AAATTGCGAG CCCAAGTTCA CGAAAAGCAA CAATGGGAAC TCGTTTTAGT GTGGAAGTCT
TTACAACAAC AAGCATCCCG TCTTCAGTCT CAACTTACCA CGGGGGAACA AGAAGCAACC
CAACTCAAAG AACAGTTAAC TAACCTTTCT CAACAAATTA GTCAAACTAG CAATGAATTA
GAACAACTCA ACCGTCAAGT TAAAGCATTA GGAGAAGATG AACAGTTAAC GGTTGCGTCA
AAATTAGCGA CTCAAAAAGC GCAACGGAAC CAACTCGAAC ACCGTCAACA AGAATTAATT
AATTTAAGTC AACAGAACCA AAAATCTCTT CAAGAAACCC AAAATAACAT TGCACAACTC
GAACACAATT TAACCCATCT GACCCAAGAA ACCCTTGAAT TAGACAACAA TACTATACCA
TTTTTGATCC AACAACGCGA TCGCACCCGT CAAACCCTAG AAATGGTGAG AACCCAAGCA
AACGCTATTG CAGAAGCATC CGATGCTTGG GTTCAAGAAC AAAGTGCATT AAGTCGGAAA
ATTACTGCTA TTCAAGATAC GCTGAACCCC CAACGAACCC AACAAGCAAA ACTCAATGAA
CGTCGTCAAC AATTAAACAA AACCATTGAT AATGAAACTC AACAACTACA GGAAATAGAA
ACTGAACTCA ACAGTCAACA CCAAGAATTA AATACTTTAT CCCATCAAGC AACGACATCC
ACCCAAGACA TACAAACCCT CGCGGAAAAA TTATCCGCAA CAGAACAAGC AAATAGTATC
CTACAAGAAA CCCAAGATCG ATTAATTAAA GAACATCGGG AAAAACAACG TCAACTTGAT
CGTTTAGAAG CATCCCAACA AGCGCAACAA GAAGCACAAG GAACCTACGC TACTCAACTC
ATTTTATCAT CCGATCTCCC TGGCGTTTGT GGATTAGTTG CCCAACTCGG ACAAGTCAAC
CCTCGCTATC AATTAGCGTT AGAAATTGCC GCCGGAGCAA GACTGACTTA TATTGTAGTC
GAAGATGATA GTATTGCTGC TGCTGGAATC GAATTATTAA AGAAAGCTAA AGCTGGACGC
GCAACTTTTT TACCCCTGAC CAAAATTAAA CCCCCAAAAA TTCAAGATAA CCCCCTCCTG
CGTCAGTCCA AAGGGTTTAT CGATCTCGCG GTTAATTTAG TATTATGTAA ACCCGAACAC
TCGGACATTT TCACCTATGT TTTGGGTAAT ACAGTGGTGT TTGAAACCCT CAATGATGCG
CGTTCCCATT TGGGACAGCA ACGCATCGTT ACATTAGAAG GAGACATCCT CGAAACTAGC
GGCGCAATGA CGGGAGGAAG TCAGCCAAAA CGGTCAAATA TTCGCTTTGG AACCGTTACT
AGAGGCGAAT CAGAAGAACT TAAAGCTATT AAGCAACGTC TCGCAGATTT GGATAATTTA
TTAGCTCGAA ATGAAGAAAA ATTAGCACAA AAATATGTAG AAATCAAGGA ACTTTCACGA
AGCTTAACAG AATTAAGACA AGGCGAAAGA GAACATCAAT TAAAACGCCA ACAATTCGAG
AAAGAAATTA AACGGTTAAG CGAACAAAAA GAGAAAATCA GCTTACAATT AGCTACCCAT
CGACAAGAGT TAGAAATAGT TACCAGTCAA TTAACTATTT TAGAGGCAGA AATTCCCGTC
TTAGAAAGCC AATTAAAGAC CGAACAACAA CGCTTAGAAG AATTGGAACA ATCTCAAACT
AATAGCGAAT GGCAAGAAAT TCAAACCCTT ATTAAGACTC AGGAAAACTC TTTACAGGAA
CGGGAACAGG AACTCAGAAA AGAAGAAGAA CGGTTAAAAG ATCTAGATAA TCAATGTCAG
CGTTTTCGGG AAAAAATTAC CGAAGGAAAG CAACTCATAG AAGCGGATAA AAGTCAAGCA
ATTAATCTTA AAAAAGAAGG CTCGGAAATT GAAACTAAAT TAGTTGAGAT TAAGCAAAAA
ATTGAAGAAT TAGAAAGTTT ATTAGAACAG TTGAATATCA AATTAGGGGA AACCAAAAAA
GACCGCGATC GCAAAGAAGA AACCTTACAA TCTTTGCAAA AAAATCAACA ACAAAAAGCG
TGGCAATTAG AAAAATTAGA AACGACTCAA CAGGAAAGAA AAGAAGCTTT AATTACCCTA
GAAGAACAAT TAGAAAGCCA ACAAAATGAA CTCCCTGAAC CTTTACCCGA AGTCCCTCTA
CTCGCAGAAA TTGACCTAGA GACTACCGAT TTAACGCCTC ATATTGAACA ACTGCAAAAA
GAAATCCGTA ACGGACAAAA ACGCTTAGAA GCGATGGAAC CCGTTAATAT GTTAGCGTTA
GAAGAACACG AAAAAACCCA AGAACGGTTA AACGAACTAA CCGAAAAATT AACCACGTTA
GAATCAGAAA GAACTGAATT ATTACTCAGA ATAGAAAACT TTACTACCCT AAGATTTCGA
TCATTTAAAG AAGCCTTTGA TGCGGTTAAT GAGAACTTTA AAACCATTTT TGCTACTCTT
TCCGATGGAG ATGGATACCT GCAATTAGAG AACGAAGAAA ACCCCTTTGA AGGAGGACTA
AATTTAGTCG CGCATCCCAA AGGAAAACCC GTTCAACGGT TAAGTTCTAT GTCAGGAGGA
GAAAAATCCT TAACCGCATT AAGCTTTATT TTTTCCCTAC AAAGATACCG TCCTTCTCCC
TTTTATGCCT TTGATGAAGT CGATATGTTT TTAGATGGAG CCAATGTAGA AAGACTCTCT
AAAATGATAC AACAACAGGC AAAACAAGCC CAATTTATTG TGGTTAGTTT GCGTCGTCCC
ATGATTGAAG CGTCACAGAG AACTATTGGA GTAACTCAAG CAAGGGGTGC TTATACTCAA
GTATTGGGGA TTAAATTGTA A
|
|---|
| Protein sequence | MVHIKRIELS HFKSFGGTTS IPFLTGFTVV SGPNGSGKSN ILDALLFCLG LATSKGMRAE
RLPDLVNHNH SNNRKTQEAS VSVTFDVSDL EDLQEFSPNS PPVTQVTVVE DNHSNGHHLP
DAEETPIDNK KLVRNSEWTV TRRLRVTKGG SYSSNYYING EACNVNELHE QLNRLRIYPE
GYNVVLQGDV TRIISMNSKE RRQIIDELAG VAEFDRKIEK TKETLEEVRE REERCQIIQT
ELQRSLERLA SDRIKAEKYQ KLRAQVHEKQ QWELVLVWKS LQQQASRLQS QLTTGEQEAT
QLKEQLTNLS QQISQTSNEL EQLNRQVKAL GEDEQLTVAS KLATQKAQRN QLEHRQQELI
NLSQQNQKSL QETQNNIAQL EHNLTHLTQE TLELDNNTIP FLIQQRDRTR QTLEMVRTQA
NAIAEASDAW VQEQSALSRK ITAIQDTLNP QRTQQAKLNE RRQQLNKTID NETQQLQEIE
TELNSQHQEL NTLSHQATTS TQDIQTLAEK LSATEQANSI LQETQDRLIK EHREKQRQLD
RLEASQQAQQ EAQGTYATQL ILSSDLPGVC GLVAQLGQVN PRYQLALEIA AGARLTYIVV
EDDSIAAAGI ELLKKAKAGR ATFLPLTKIK PPKIQDNPLL RQSKGFIDLA VNLVLCKPEH
SDIFTYVLGN TVVFETLNDA RSHLGQQRIV TLEGDILETS GAMTGGSQPK RSNIRFGTVT
RGESEELKAI KQRLADLDNL LARNEEKLAQ KYVEIKELSR SLTELRQGER EHQLKRQQFE
KEIKRLSEQK EKISLQLATH RQELEIVTSQ LTILEAEIPV LESQLKTEQQ RLEELEQSQT
NSEWQEIQTL IKTQENSLQE REQELRKEEE RLKDLDNQCQ RFREKITEGK QLIEADKSQA
INLKKEGSEI ETKLVEIKQK IEELESLLEQ LNIKLGETKK DRDRKEETLQ SLQKNQQQKA
WQLEKLETTQ QERKEALITL EEQLESQQNE LPEPLPEVPL LAEIDLETTD LTPHIEQLQK
EIRNGQKRLE AMEPVNMLAL EEHEKTQERL NELTEKLTTL ESERTELLLR IENFTTLRFR
SFKEAFDAVN ENFKTIFATL SDGDGYLQLE NEENPFEGGL NLVAHPKGKP VQRLSSMSGG
EKSLTALSFI FSLQRYRPSP FYAFDEVDMF LDGANVERLS KMIQQQAKQA QFIVVSLRRP
MIEASQRTIG VTQARGAYTQ VLGIKL
|
|---|
| |