Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_0975 |
Symbol | |
ID | 8390284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | - |
Start bp | 1000285 |
End bp | 1001043 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 644978991 |
Product | TM2 domain containing protein |
Protein accession | YP_003136744 |
Protein GI | 257058856 |
COG category | [S] Function unknown |
COG ID | [COG2314] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.334071 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.148819 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAA ATCGATTAAT TGCTGTAATA ATTACGTTTT TTGGAGGAGG TTTTGGTCTT CATAAGTTTT ATTTGGGTGA AAATTTTATG GGAATCCTAT ATCTGATTTT TTCTTGGGCT TTTATTCCTA GTATTTTGGC TTTTTTTGAT TTTTTAGGGT TACTTTTTAT GGAAAATAGG GCATTCGATG AAAAATACAA TTATCGTTAT CTAAATCTTA CTCAATCTGA ATCTTCTAAA GATAAAACAA CAGCTTTAAT CGATCTTAAA AAATTATATG ATCAAGGGGT TATTACGGCT GAAGAATTTG AGGAAAATCG TAGAAAGATT TTAGAACCTA TACGAAACTT ATCAACTAAG AAACAAACGA AAATTGATAT TAATACTTGT TCTAAAGATG AATTAGTTTA TCAGCTTAAT CTTCCTATTT TTTATGCTAA TGATATTGAT GCTGTCCGTC GTTCAGGTTA TCTGTTTACT CACGTTGAGG AATTACATGA GATTGCGGGT TTACCAGAAA ATTATATTAA AAAGTTAGCT CCTTTGGTGA CATTTAGCTA TGACATTAAT AAAGAAATTG ATGTTTCTTG GCAACGGTTA AATGTTTATT CGATTGATCA ATTAATGCGA GATGGACTTG ATGCAAAAGT TGCTCAAAAA ATTGTACAAG AAAGAGATAA AAATGGGGTT TATAAATCAG TGATAGATAT CCAACATCGC ACAGGATTAC CGGTTAATTA TTATCGTCAT TTGATCTAG
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Protein sequence | MKKNRLIAVI ITFFGGGFGL HKFYLGENFM GILYLIFSWA FIPSILAFFD FLGLLFMENR AFDEKYNYRY LNLTQSESSK DKTTALIDLK KLYDQGVITA EEFEENRRKI LEPIRNLSTK KQTKIDINTC SKDELVYQLN LPIFYANDID AVRRSGYLFT HVEELHEIAG LPENYIKKLA PLVTFSYDIN KEIDVSWQRL NVYSIDQLMR DGLDAKVAQK IVQERDKNGV YKSVIDIQHR TGLPVNYYRH LI
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