| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_0222 |
|---|
| Symbol | rplM |
|---|
| ID | 8389526 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | - |
|---|
| Start bp | 217187 |
|---|
| End bp | 217642 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644978268 |
|---|
| Product | 50S ribosomal protein L13 |
|---|
| Protein accession | YP_003136026 |
|---|
| Protein GI | 257058138 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0102] Ribosomal protein L13 |
|---|
| TIGRFAM ID | [TIGR01066] ribosomal protein L13, bacterial type
[TIGR01077] ribosomal protein L13, archaeal/eukaryotic |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0145687 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0118859 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAAA CCATCACACC TAACCCAGAA ACCCTTGACC AGAAATGGTA CGTTATAGAC
GCAGCCGACC AGCGTTTAGG ACGTTTAGCC TCAGAAGTTG CCCAAATTCT GCGGGGAAAA
AATAAACCCA CCTTTACCCC CCACATGGAT ACAGGCGATT TTGTGATTAT TGTCAATGCG
GAGAAAGTGG TTGTCACCGG GAAAAAGTCC AGCCAAAAGC TCTATCGTCG CCACTCTGGA
AGACCAGGGG GGATGAAAGT TGAGACGTTT GAGAAATTAC AGGCGCGTCT TCCTGAGAGA
ATTGTTGAAC ACGCGGTCAA GGGAATGTTG CCGAAAAATT CCTTGGGTCG CAAACTGTTT
ACTAAGTTAA AAGTTTATAC GGGGCCAACC CATCCCCACC AAGCTCAACA ACCAGAAACC
CTTATTGTTA ACACGATTCC TACTGGAGAA AATTAA
|
|---|
| Protein sequence | MNKTITPNPE TLDQKWYVID AADQRLGRLA SEVAQILRGK NKPTFTPHMD TGDFVIIVNA
EKVVVTGKKS SQKLYRRHSG RPGGMKVETF EKLQARLPER IVEHAVKGML PKNSLGRKLF
TKLKVYTGPT HPHQAQQPET LIVNTIPTGE N
|
|---|
| |