Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_0152 |
Symbol | |
ID | 8389455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | - |
Start bp | 157256 |
End bp | 158185 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644978199 |
Product | Polyprenyl synthetase |
Protein accession | YP_003135958 |
Protein GI | 257058070 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00117274 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00332618 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGTCACAA CAGGCGAAAC CCTTGTGACG CAGCAAGAAA CATCAAATTT CGACCTTGCG TCCTATCTCA AAGATAAACA ACAGCTAGTT GAAGCAGCAT TAGACCGCTC TCTTGCTATT ACCCGTCCCG AAACAATCTA TGAAGCGATG CGTTACTCCC TATTGGCAGG GGGGAAGCGA CTAAGACCGA TTCTCTGCTT AACCACCTGT GAACTCCTTG GAGGCACTCT CGAAATGGCA CTGCCCACAG CTTGTGCCTT AGAAATGATT CATACGATGT CTTTAATTCA CGATGACCTG CCCGCGATGG ACAACGATGA CTATCGCCGG GGTAAGTTAA CGAATCATAA GAAGTATGGG GAAGATATCG CTATTTTAGC CGGAGATGGC CTATTAGCCT ATGCCTTTGA ATACGCAGCC ACCCAAACCC GTAATGTAGA CCCTCATAAT CTTATCAACG TTCTTGGCCG TTTGGGTCGG ACCGTCGGTC CGGCCGGATT AGTCGGAGGC CAAGTACTCG ACCTAGAATC AGAAGGGAAA CCCGATATTA CCGTAGATAC TTTGAAATTT ATTCATACCC ACAAAACCGG AGCTCTGCTC GAAACCTCAG TGGTTTCTGG GGCAATTTTA GCCGGGGGCT CGACTGAAGA TATTCAACGT CTATCTCAAT ACGCCCAGAA TATCGGCTTA GCTTTCCAAA TAATCGATGA CATTTTAGAT ATTACTTCCA CTCAAGAAGA ATTAGGCAAA ACCGCCGGAA AAGATCTTAG AGACCAAAAA GCAACCTATC CTAGTCTTTG GGGACTCGAA GAATCTAAAA AACAAGCCCA AAATTTGGTT AGTGGCGCGA TCGCTCAATT AACCCCCTAT GGCAATAAAG CGGAACCCCT AAGGGCGATC GCTAATTTTA TCGTCACCCG CAATAACTAA
|
Protein sequence | MVTTGETLVT QQETSNFDLA SYLKDKQQLV EAALDRSLAI TRPETIYEAM RYSLLAGGKR LRPILCLTTC ELLGGTLEMA LPTACALEMI HTMSLIHDDL PAMDNDDYRR GKLTNHKKYG EDIAILAGDG LLAYAFEYAA TQTRNVDPHN LINVLGRLGR TVGPAGLVGG QVLDLESEGK PDITVDTLKF IHTHKTGALL ETSVVSGAIL AGGSTEDIQR LSQYAQNIGL AFQIIDDILD ITSTQEELGK TAGKDLRDQK ATYPSLWGLE ESKKQAQNLV SGAIAQLTPY GNKAEPLRAI ANFIVTRNN
|
| |