| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_0874 |
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| Symbol | |
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| ID | 7286790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7425 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011884 |
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| Strand | - |
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| Start bp | 693864 |
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| End bp | 694565 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643583883 |
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| Product | rhodopsin |
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| Protein accession | YP_002481621 |
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| Protein GI | 220906310 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5524] Bacteriorhodopsin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000448846 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGGCTC AAAGTTTCTG GTGGTTTTAC GCTGGTCTGG AGGCGATCGC CGTTTTCTAC
CTGGCCCAAC TCAGCCGTTC CCCCTGGGGT GTACCCCGCT GCTTCTATCA ACTGGCGATC
GGGATTTCCC TCTGGTCAGG CTTGATGGCT GTACTTTTAG CCCTGGGTGC AGGTCAGGTG
GAATTAGGGG GTCAGGTTAT CTCCTATGCC CGCTATCTGG ACTGCTTGAT CGCCACGCCG
GGGGTACTCC TCAGCCTTTG CTGGACAGGA ATGCTCACCC TGCGGCGGGA AAAACACCTG
ATCCATGCCT TGCTAGGAAT GGCTGGAGTA ATGGTTTTCA GTAGTTGGAT GGGGGATCTA
TCGACCAGTC GGGCTTGTTA CCTCTGGTAT GCCAATAGCG GGGTGGCGTT TGGAGCAATT
ATGAAGGTGG TCTGGGGGTT TCTGCGGGAG ACGGCTCAGC TGCAGTCCCA TCCACTGATG
CCCAGCTTTT ATGATTGTTT GGCTGCCTAT CTCACTGTGT CCTGGGGAGG CTATGCCCTG
GTCTGGGTGA TGGGTTCGGC GGGATGGGGG GTCATTGATC CAACACAGGA AGCGTTCCTA
TTTTGCCTGC TGTCATTTGC GGGTCAAACC GGATTTTTGC TGTTCAACCT CTACGGACTC
CGTCGTCTGA ATCAACTCAG GTTGAGATCC TTAGCAAGAT AA
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| Protein sequence | MLAQSFWWFY AGLEAIAVFY LAQLSRSPWG VPRCFYQLAI GISLWSGLMA VLLALGAGQV
ELGGQVISYA RYLDCLIATP GVLLSLCWTG MLTLRREKHL IHALLGMAGV MVFSSWMGDL
STSRACYLWY ANSGVAFGAI MKVVWGFLRE TAQLQSHPLM PSFYDCLAAY LTVSWGGYAL
VWVMGSAGWG VIDPTQEAFL FCLLSFAGQT GFLLFNLYGL RRLNQLRLRS LAR
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