| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_0549 |
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| Symbol | dapF |
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| ID | 7286458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7425 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011884 |
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| Strand | - |
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| Start bp | 359317 |
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| End bp | 360159 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643583556 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_002481301 |
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| Protein GI | 220905990 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCTGC AATTTACTAA ATATCAGGGT CTGGGCAACG ATTTTATTTT GATTGACAAT
CGCAACGAGG CTACCCCCTT GCTGACGCCA GAACAAGCGG TTGACATTTG CGATCGCCAC
TTTGGTGTGG GTGCAGACGG GGTGATTTTC CTGTTGCCAG CCACGGGTGA AACGGACTAT
ACGATGCGGA TCTTTAACTC CGATGGCTCC GAACCGGAAA TGTGCGGCAA TGGGATTCGC
TGTCTGGCCC GGTTTGCAGC CGATCTGGAA GGCCATGCTC TGACCGCTAC CCCCCGCTAT
CGCATTCATA CTCTGGCAGG CACTATTACA CCGCAAGTGC GATCGGATGG GCAGGTGACG
GTGGATATGG GCCAACCCCG GCTATTAGCA GGTGAAATTC CGACAACGTT GAAACCAGCG
GCAGAGAAAG TGATTGCTCA ACCCCTGCAG GTGGGGGGCC GAAGCTGGAG CGTCACCTGT
GTGAGTATGG GCAATCCCCA TTGCATTACC TTTGTCGAGA ATGTCGCCGC GATCGACCTG
CATACCCTGG GGCCACAATT TGAACATCAC CCGGCCTTTC CCCAACGGAT TAACACAGAG
TTTATTGAGG TCATCCGCCC TGACTATCTG AAAATGCGGG TTTGGGAACG GGGAGCTGGG
ATGACCCTGG CCTGTGGCAC GGGAGCCTGT GCTGCTTTAG TGGCCGCCGT ATTGAATGAT
TTGAGCGAAC CACGGGCAAC GGTGGAATTG CCAGGTGGGC CGCTGGAGAT TGAATGGTCA
GCGCCTGGAC AGGCTGTGTT AATGACTGGC CCGGCAGAAC AGGTATTCCA AGGCGTTCTT
TAA
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| Protein sequence | MSLQFTKYQG LGNDFILIDN RNEATPLLTP EQAVDICDRH FGVGADGVIF LLPATGETDY
TMRIFNSDGS EPEMCGNGIR CLARFAADLE GHALTATPRY RIHTLAGTIT PQVRSDGQVT
VDMGQPRLLA GEIPTTLKPA AEKVIAQPLQ VGGRSWSVTC VSMGNPHCIT FVENVAAIDL
HTLGPQFEHH PAFPQRINTE FIEVIRPDYL KMRVWERGAG MTLACGTGAC AALVAAVLND
LSEPRATVEL PGGPLEIEWS APGQAVLMTG PAEQVFQGVL
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