| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_5813 |
|---|
| Symbol | |
|---|
| ID | 8736289 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | + |
|---|
| Start bp | 6220146 |
|---|
| End bp | 6221840 |
|---|
| Gene Length | 1695 bp |
|---|
| Protein Length | 564 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 646506440 |
|---|
| Product | putative transcriptional regulator |
|---|
| Protein accession | YP_003397589 |
|---|
| Protein GI | 284047249 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00457165 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | TTGCCCGACC ACCTCTTCTC TCCCGACGCA CTGGCGGCGC TGACGCAGAT CGCGGCCGGC
GCGCGGGCGT GTGACCTTGA ATCCGAGACG CTGGATTTCA AGCAGGATGC GGGCAGCGAC
GGAGAGACGA TCCGCGTCCT GCTTGACGCC GCCATCTGCT TCGCGAACCT CAAAGGCGGC
TCGATCGTGG TCGGCGTCGC AGACGACGTG CCTGGCCCCG ACGCCTTCCT CGGTACTGAC
ATCTCGATCG AGCTCATACG GCAACGGATC TACGAACGCA CACAGCCGGC GATGGTCGTG
AGCGCGATCG AGCACGAGCA CACGGGCAAG CGGCTCGTCA TCGTGAACGT AGCCGAGGGC
ATGGAGATGG CCTCGGACAC GAAAGGTCGT TCCTCACGCC GCCACGGATC CGCCTGCCTG
CCGCTCAGCA TCAGTCAGGC GGCCACCCTC AACGACGACC GGCGACGATT CGACTGGTCT
GCCGAACCCA GCGACCTGAC ATTGGCTGAC GTGTCCGAGA CCGCGCTGGA CGAGGCTCGC
ACTCGCCTCC GTCGCTACGA CGATGAGCGT CGGCGCCTCG CCGAGGCGCC GACTCGCGAT
CTGCTGGGCG ACCTCGGCCT CGTCCGTGAC GGCCGCCTCA CGCGTGCGGC GGAGGTGCTG
TGCTGCGCCC GCGAGGCGCA TCCGCCGTTC ACCTACGTAT TCCGAGAATC CGCGGGCGGC
GAGGTCCGAA GCCAGTACCG CGAATCCGTC CCCGGCCTGA TCGCATACCG AGACGTGTTG
AGCCGGATCG TCGCGAGCAC TTCGCCGACG CCAGTAGTGC TGCGCGACGG ACAGCAGCTC
GAGTTGCACG ACTTCCCCCT CGTCGCCATC CGAGAGGCGC TCGGCAACGC CCTCCTCCAT
CGCGACTATC GCCAGCCGGA AGCGATCTAC GTCGACCATT CGCCGCACGT TCTCTCGTTC
GTGTCGCCAG GACCGCTCGT CGTGGGGGTC ACACCCTCAA ACATCCTCCA CGTCTCCAGC
AAGCCCCGCA ATGCTCTCCT TGCCGGTGTC GCACGCACGC TCGGCCTCGC TGAGGAGCTG
AGTCGCGGGA TTGACCGCAT GTACCGCGAG ATGATCAAGC TCGGCAAGCG TCCTCCTGAG
ATCACAGACG AGGCGCCGTT CCGCGTACGC GTCGATCTGA CCGGCGGCGC CCCGAATCAG
ATCGTCGCCA GGTTCACCGC TACGCTGCCG CATCACGTGC AGGACGACGT GGACACGATG
CTCGTCCTCT TCACGCTGAT GAATCGTCAG CAGATCACCG TACGCGAGCT GGCGCCCACG
CTCCAGCGTG GGAACGCCGC AACCGAGGCG GTGCTCGAAC GGCTCTCCGA GCCGGACATC
GACGTGGTCA CGCCGGTCAA TCGCTCAGGC CAAGCCCGCT GGCAGCTCAG CTCACGCGTC
TTGGCTGAGC TTCGCCCTGC GCTCGCCTAT CGGACGATGA ACGCTGACCA AATCGACCGC
AAGATCGTCG AGTTCGTGCG CAAGAACGCC ACGATCGACA ACAAGACGCT TCAGATCTTC
TTCGACCTCG ACGTCAACGG CGCCGCCTAT CGACTGCGCA CGCTCGTCCA ATCCGGAGTC
CTCCAGAAGC TCGGCGAGCA GCGCCGAGGT CCCGGCATCC AGTACGGACC GGGCCCCGCG
TTCCCGAAGC GCTGA
|
|---|
| Protein sequence | MPDHLFSPDA LAALTQIAAG ARACDLESET LDFKQDAGSD GETIRVLLDA AICFANLKGG
SIVVGVADDV PGPDAFLGTD ISIELIRQRI YERTQPAMVV SAIEHEHTGK RLVIVNVAEG
MEMASDTKGR SSRRHGSACL PLSISQAATL NDDRRRFDWS AEPSDLTLAD VSETALDEAR
TRLRRYDDER RRLAEAPTRD LLGDLGLVRD GRLTRAAEVL CCAREAHPPF TYVFRESAGG
EVRSQYRESV PGLIAYRDVL SRIVASTSPT PVVLRDGQQL ELHDFPLVAI REALGNALLH
RDYRQPEAIY VDHSPHVLSF VSPGPLVVGV TPSNILHVSS KPRNALLAGV ARTLGLAEEL
SRGIDRMYRE MIKLGKRPPE ITDEAPFRVR VDLTGGAPNQ IVARFTATLP HHVQDDVDTM
LVLFTLMNRQ QITVRELAPT LQRGNAATEA VLERLSEPDI DVVTPVNRSG QARWQLSSRV
LAELRPALAY RTMNADQIDR KIVEFVRKNA TIDNKTLQIF FDLDVNGAAY RLRTLVQSGV
LQKLGEQRRG PGIQYGPGPA FPKR
|
|---|
| |