| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_3388 |
|---|
| Symbol | |
|---|
| ID | 8733837 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | - |
|---|
| Start bp | 3608759 |
|---|
| End bp | 3611299 |
|---|
| Gene Length | 2541 bp |
|---|
| Protein Length | 846 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 646504005 |
|---|
| Product | anti-sigma-factor antagonist |
|---|
| Protein accession | YP_003395181 |
|---|
| Protein GI | 284044841 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2409] Predicted drug exporters of the RND superfamily |
|---|
| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCATC GCCCGAACCT CGCCCAGCGC GCAGGGCGTT GGAGCGCCGA GCACCGGCGC
ATCGCGATCG GCGGCTGGAT CGCACTCGTG ATCGTGAGCC TCTTCATCGG CAGCGCGGTC
GGCACACAGC ACCTCGCCAG CGAGGATCTC GGCAACGGCG AGTCGCGCCA GGCCGATCAG
ATGCTCGCCG ACGCCGGCTT CGACGACCTC GCGCCGGAGA CCGTCCTGAT CCAGTCCCGC
GACGGCGACC TGACGATCGC CGACCCCGCC TTCAGAGCCG GCGTGAGCGA CGTCGTCGTG
ACGCTGCGCA GATTCCCGAC CGTCACGAAC GTCGAGTCGC CGCTGTCGCC CGCACACGCG
CAGCTCGTCT CCAGAGATGG CGGGTCCGCG CTCGTCTCGT TCGACATCAG AGGCGACGAG
GACGCCGCCG AGGACCGCGT CGGGCCGATC CTCGACGCCG TCGCGCAGGT CGACCAGCGC
CATCCGCGGC TGCGGATCGA GGAGTTCGGC GACGCGAGCG CCAACAAGGC GCTGACAAAG
GCGTTCGAGG ACGACTTCCG CAAGGCCGAG TTCCTCTCGC TGCCGATCAC GCTGGCGATC
CTCGTGCTCG CCTTCGGCGC GCTCGTCGCC GCCGGCCTGC CGCTGCTGCT CGGGCTCTCG
GCGGTCGCGA TCACGCTCGG GCTGCTTGCG CCCGTGAGCC AGCTGTCCGG GGTCGACGAG
GCGATCTCGT CGGTGATCCT GCTCGTCGGT CTCGCGGTCG GGGTCGACTA CTGCCTCTTC
TACATCCGCC GCGAGCGCGA CGAACGCCGG CTGGGGCGGG GGAAGGAGGC GGCGCTCGAC
CTCGCGGCCG CCACGTCGGG CCGGGCGGTG CTCGTCTCCG GCTTCACGGT GATGGTCGCG
ATGGCGGGGA TGTACATCAC CGGCAACGCG ACGTTCCAGT CGTTCGCGAC CGGCACGATC
ATGGTCGTCG CGATCGCCGT GATCGGCTCG CTGACGGTCC TGCCGGCGAT GCTGTCGCTG
CTCGGCGACC GGATCGACAA GGGCCGCGTC CCGCTGGTCG GGCGGCTGCA CAAGCCCGGC
TCGGAGACCG GCTTCTGGGC GACGATCGTC GGCGCCGTGC TGCGCCATCC GCTGCCGTCG
GTCCTGCTCT CCGGCGGCCT GCTCGTCGTG CTCGCGCTGC CGGCGCTCGG CCTGCACACG
GTCAACTCGG GGGTCCAGGG GCTGCCGCGC GACCTGCCGG TGATGCAGAC CTACGACCGC
ATCCAGGCGG CGTTCCCCGG CGAGCCGACG GCCGCCACGA TCGCGCTCAG CGCGCCGGAC
GCGACCGCTC CGCAGACCGC GGCAGCGATC GCGCAGCTGC GCAGACAAGC GCTCGCGACG
GGCTTGATGC AGGATCCTGT CACCGTCACG GTGAGTCCCG ACAGAACGGT GACGAAGATC
GACGTCCCGC TCACCGGCAC CGGCACCGAC GACGCGTCCG ACAGCGCGCT GCTTGCGCTG
CGCGACGAGA TCGTGCCCGC GACGGTCGGG AGACTGCCGT CGGCGGAGGC GCCGGTGACC
GGGCTCACCG CGAACTCCTA CGACTTCAAC CAGCTGATGA AGTCGCGCGC GCCGTGGGTC
TTCGTCTTCG TCTTGTCACT TGCGTTCGTG CTGCTGATGG TGACGTTCCG CTCGATCGTG
ATCCCGGCGA AGGCGATCGT GCTGAACCTG CTGTCGGTCG GCGCGGCGTA CGGGATCCTC
GTGTGGATCT TCCAGGACGG TCACCTCGAG TCGCTGATCG GCTTCACGTC GATCGGCGGC
ATCACCTCGT GGCTGCCGCT GTTCCTGTTC GTGATCCTGT TCGGCCTCTC GATGGACTAC
CACGTGTTCA TCCTCAGCCG CGTCCGCGAG GGCTACGACC GCGGGATGCC GACGGAGGAG
GCCGTCTCGC ACGGGATCCG CGCGACGGCC GGCGTCGTCA CGAGCGCCGC GGCGGTGATG
GTCGGCGTCT TCGCGATCTT CGCCACGCTC AGCTCGATCG ACTTCAAGAT GATGGGCATC
GGGCTGTCGG TCGCGGTGCT GCTCGACGCG ACGATCGTGC GCGCGGTGCT GCTGCCCGCG
ACGATGAAGC TGCTCGGCGA CTGGAACTGG TACCTGCCGC GGTGGCTGGA GTGGCTGCCG
CGGGTCGCGG TCGAGACCGA GCGCGTCGAG CATCCCGAGG GCGCCGTGCT GGCGATCGAC
GTCGAGCGCG AGGACGGGCG CACGTCGCTC CAGCTCAGCG GCGAGCTCGA CCTCCAGACG
ACGCCGCAGT TCCGCGACCG GCTCGCGGAC GTCGAGCCGC AGGACGGGAC GCTCGTCGTC
GACCTGCGGC GGCTGACGTT CATCGATTCG AGCGGGATCG GCGAGCTGGT CGGCGCGCAC
CAGCGGGCGC GCCGCGCGCA TCGCCGGATC GTGCTGGTGC GGACGGACGG GACGGCGATC
GACCGCACGC TCCACCTGAC GGCGGTCGAC AAGCTGTTCG AGACGGTGTC GGACCCGCCC
GAGCTGGCCG GTCGCAGCTG A
|
|---|
| Protein sequence | MSHRPNLAQR AGRWSAEHRR IAIGGWIALV IVSLFIGSAV GTQHLASEDL GNGESRQADQ
MLADAGFDDL APETVLIQSR DGDLTIADPA FRAGVSDVVV TLRRFPTVTN VESPLSPAHA
QLVSRDGGSA LVSFDIRGDE DAAEDRVGPI LDAVAQVDQR HPRLRIEEFG DASANKALTK
AFEDDFRKAE FLSLPITLAI LVLAFGALVA AGLPLLLGLS AVAITLGLLA PVSQLSGVDE
AISSVILLVG LAVGVDYCLF YIRRERDERR LGRGKEAALD LAAATSGRAV LVSGFTVMVA
MAGMYITGNA TFQSFATGTI MVVAIAVIGS LTVLPAMLSL LGDRIDKGRV PLVGRLHKPG
SETGFWATIV GAVLRHPLPS VLLSGGLLVV LALPALGLHT VNSGVQGLPR DLPVMQTYDR
IQAAFPGEPT AATIALSAPD ATAPQTAAAI AQLRRQALAT GLMQDPVTVT VSPDRTVTKI
DVPLTGTGTD DASDSALLAL RDEIVPATVG RLPSAEAPVT GLTANSYDFN QLMKSRAPWV
FVFVLSLAFV LLMVTFRSIV IPAKAIVLNL LSVGAAYGIL VWIFQDGHLE SLIGFTSIGG
ITSWLPLFLF VILFGLSMDY HVFILSRVRE GYDRGMPTEE AVSHGIRATA GVVTSAAAVM
VGVFAIFATL SSIDFKMMGI GLSVAVLLDA TIVRAVLLPA TMKLLGDWNW YLPRWLEWLP
RVAVETERVE HPEGAVLAID VEREDGRTSL QLSGELDLQT TPQFRDRLAD VEPQDGTLVV
DLRRLTFIDS SGIGELVGAH QRARRAHRRI VLVRTDGTAI DRTLHLTAVD KLFETVSDPP
ELAGRS
|
|---|
| |