Gene Cwoe_1404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCwoe_1404 
Symbol 
ID8731844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameConexibacter woesei DSM 14684 
KingdomBacteria 
Replicon accessionNC_013739 
Strand
Start bp1472216 
End bp1475911 
Gene Length3696 bp 
Protein Length1231 aa 
Translation table11 
GC content72% 
IMG OID646502022 
Producthypothetical protein 
Protein accessionYP_003393207 
Protein GI284042867 
COG category[S] Function unknown 
COG ID[COG4886] Leucine-rich repeat (LRR) protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.868224 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCCTC GATCTTCGTC GCGGCCGGGG TGCCGCGCGG TGTTCGCCGG TATCGCAGCG 
GCGCTCACGC TGACCGGCGG GCTGACGCTC GCGCCGGCGC AGCTGCCGCT CGCGCCCGTC
GCTGCCCACG CCGCCGACAC CGACATCGTC AACATCCCCG ATGCCAACCT GAAGGCCAGA
CTCAACACGA GACTCGGCTC TGGCCGGCCG GCGACTCAGG ACATCACCGT TGGCGAGGCG
GCGAGTCTGT TCGGCTCGTA CTCGCTCACC GGGCCGTTCG CCGATCTCAC CGGCCTGGAG
GCGTTCACGA ACGTCAGGGG CATCACGATC GCGGGGATCT CCGCGAGACA GGCCAGCACG
TACACGAGCC TCGCGCCGCT GGCGGGGCTG ACGAACCTCA CGTCGCTGCA CCTGCAGAGC
GGCAAGGCGC GCAACCTGAG ACCGCTGGCG GGTCTGACGA ACCTGGCGGC CCTCACGGTG
CAGGGCCAGG GCGTGACCAA TCCGACGCCG CTGGCGTCGC TGACGAACCT GACGTCGCTG
AACCTGACCA ACAACGCGAT CAGCGATGCC AGCCGGCTGC CGCAGCTGCT GAACCTGACG
ACGCTGGACC TGACGCGAAA CCGGATCACG AACCCCGCGC CGCTCGTCGG CAAGGTCGAT
CCCGCGAAGA TCAGGACGCT TGGCCTCGCG GTCAACCGGA TCGCGGACGC GTCGTCGCTG
GCGGTCCTCG GCGACAGCAG ACTTGTCGAC TACACGAGCT CCGGCGAAGG GCTGCTGCTG
TCGAGCAACC GGATCACCGA CTTCACGCCG TTCGACAGCT GGAGCAGACC GCCGTCGTGG
GATCAGACGG ACTCCCAGCA GCTCTACGTG GGGGCATACC AGCCCGGCGG GGTCGTCCTG
CCGGCGCTGA GACAGAGCGC CGCGATCACC GATTCGCTGA AGGTCGAGCC GAGCTCCGTG
GGCAGCTACG ACCCTGCGAC GGGACGAGTC ACGCTGGCCG ACGAGAGCGC CGCGAGCGTC
GAGCTGATGT CGATGGTTCC CGGCGACTCG TCGCCGCAGC CGCGCTGGAC GGTGAACTTC
TCCGACCCAC CGGTCGCTCC CGTCGACGGC ACGCCGCCGA CGGTGACCGG CACCAGCGAG
GTCTGGTCGA CGCTCCAGGT GACCGATCCC GGCACGCTGG GCGCCGAGCC CGATGAGCCC
GCGTGCTCGC CATCGAGCCT GCGATACCAG TGGCTGAGTG ACGGCGTGGA GATCGTCGCC
AACCCGCACG TCACCGACCC GGACAGCGAC ACCATTCATC CGGGGGCCGG CCTGCCGATC
GGGCCGACCT ACACGGTCTG GCCGCGCGAC CTCGGGCGCA GACTCTCGGT GCGGGTGACG
TGCGCGGACG CGAGCGGGCA GGGGACGTCG GCGCCGACGC CGGTCGTCAC CAACGGCGAG
GCGGAGAAGC CGGTGATCGG GACGCTCGAC GGCGGCCAGG TCCGGGTCGA CTCGTCGTCG
ACCGCGTCCT TGCTCGTCGC CGGACGGTCC GGGGTGGCGC TCGACCCGGA CGGCACGAGA
GTGCCGTTCC ACGTCGCCCA GCTTGGCGCC GACGGACGGC TGACCGATCC GTCGCAGCTG
AGACTCAGCG CGACCGCGGC GAACGAGCAC AACGACCCGA ACCGCGATCC GGCGACGGTG
CTCGCGCCTG GCGACATCGA GTTCGGCGGC AGCGGCTCCA ACCGCTGGGT CGTGCTGCGG
CCCAAGAAGG AGACGGCGGA GCCCAGCGGC GGCAGCATCG CGCCCCCGCT GCGCGTCACC
GTCACGGTCA CCGGCCCGTC GGGCAAGACC GAGCAGGTGT CGTTCATCTA CGAGGTCTCG
CGCGCGACGA CGCCGACCAG CCGCGTGCTG CTGGCGACGT CGGACGCCTC GACCGCGATC
GCGGTCGGCG ACGGCCACCT GCTGGTCGCC GACGACGAGC GCGCCCCGAT CCGGCTCTAC
GACGCCCGCG TCTCGGGCCG TGAGCTCACG ACCTTCACCC CCGGCCCGAC CGGCGGCGAG
GTCGACTTCG AGTCCGCGGC GCGCAAGGGC GACGCGATCT ACTGGCTCGG CTCGCACGGC
AACAGAAAGG ACGGCGGCGG CCAGGCGAGC CGTCACCGCA TCTACCGGAC GAGACTGACC
GGCCGTGGCC CCAACGCGAG AATCGAGCCG GTCGGCACGC CGTACCAGAG GCTGCGCACC
GATCTGGCAG AGTGGGATCG CACCGAGCAC GACGGTTCGC TGGGGCTCTA CGCCGCCGGC
GTGGGCAAGA TCCCGCCGGA CCGTCTCAAC GGCTTCAACA TCGAGGGCGC CGAGTTCTCG
CCCGACGGCA GCTCGCTCTA CCTCGGCTTC CGCTCACCGG TCGTGCCGCC GGAGTCCGGC
GGCAGAGCGC TGATCGTGCC GCTGGAGAAC GTCGAGGAGC TGACCGCCGG CACCGCGAGA
GCGGCCGAGT TCGGCGACCC GATCCTGCTC GACCTCGACG GCCAGAGCAT CCGCGAGATC
CGCAAGAACG CCGCCGGCGA GTACCTGATC CTCTCCGCCA CGGCGGGGCT GCCCACCGCT
GCGACCGAGC AGGCGCTGTG GGCGTGGGAC GGCGATCCGC ACGTCGCCCC CGTGCGGCTT
ACCACCCACG TCGCGCGCGA CCTCGAGCCC GACCACGCCG ACAATGCCGG CGCCTGGGAG
GGAATCGGCG AGGTCCCGGC GCGCCTGGCT CCGGGGCAGC AGGTCCGTCT GCTGATGGAC
CAGGGCTACG TCGAGCTCTA CGGATCTGGC GTGGAGAACA AGGACGACAG CAACGACTGG
ACGCGCAAGT CGCGCACCGA CCTGGTCGAG CTGACCGGCG CGGTCGGAAC GCTCGCCGCG
TCGAGCGCAA CGTCGATCGC GTTCCCCGCG CAGGCGGCGC AGACGACCGG CGCGCCGAGA
ATCGTCACCG TCACCAACAG CGGGTCGGGC AAGCTGCGGA TCGGCAGAGT GGGCGGGACC
GACGCGGACG GCACGTCGTT CGACGACTTC CTCGTCAGCC GCAACGAGTG CAGCGACGAG
GTGCTCGTGC CGGGCGCCTC GTGCAAGATC GGCCTGCGCT TCTCGCCCGC GCGGCAGGAC
GTGACCTCGA ACGCGACGCT GGTCGTGAAG ACGAACACGG CGAGCGGCGA GCTGTCGGTG
CCGCTGTCGG GCACCAGCAC CGCGCTCCCC ACCGGCCCCG GCGGTGACGA TGGCTCGGAT
GGCGCCGACG GTGCCGACGG CGCGAGAGGA GACGCCGGCG CCGCGGGCAG AGACGGCGCT
GGTGGCCCTG TCGGGCCCGC GGGCCCGCTC GGACCGATCG GCCCGAAGGG CGACACCGGC
GTGCCGGGCA GAGACGGCAC GTTCTCGCTG AGCACCACCC GTTCCACCGC GACGAGAGTC
CGCCGCGGCC GCACCGCGAC CGTGTCGCTG CGCGTCAGGA ACGGCACCGC CGCGGCGTTC
GACGGCTCGA CGCTGACCGC GTCGGCGCCG AAGGCGCTCG AGGCCCACGG CCGCACGGTC
AAGCTGGGGC GTCTCCGCGC CGGCGAGTCG CGCACGGTCC GTCTGCGCCT GACGATCGGC
CGCACCGCCC GCGTCGGCAC GCACGTCGTC ACGGTCCGCA TGCGGGTCGG CCGCGAGACG
GTGACGCAGA CAGTCCAGCT GCGCGTCACG CGGTAG
 
Protein sequence
MSPRSSSRPG CRAVFAGIAA ALTLTGGLTL APAQLPLAPV AAHAADTDIV NIPDANLKAR 
LNTRLGSGRP ATQDITVGEA ASLFGSYSLT GPFADLTGLE AFTNVRGITI AGISARQAST
YTSLAPLAGL TNLTSLHLQS GKARNLRPLA GLTNLAALTV QGQGVTNPTP LASLTNLTSL
NLTNNAISDA SRLPQLLNLT TLDLTRNRIT NPAPLVGKVD PAKIRTLGLA VNRIADASSL
AVLGDSRLVD YTSSGEGLLL SSNRITDFTP FDSWSRPPSW DQTDSQQLYV GAYQPGGVVL
PALRQSAAIT DSLKVEPSSV GSYDPATGRV TLADESAASV ELMSMVPGDS SPQPRWTVNF
SDPPVAPVDG TPPTVTGTSE VWSTLQVTDP GTLGAEPDEP ACSPSSLRYQ WLSDGVEIVA
NPHVTDPDSD TIHPGAGLPI GPTYTVWPRD LGRRLSVRVT CADASGQGTS APTPVVTNGE
AEKPVIGTLD GGQVRVDSSS TASLLVAGRS GVALDPDGTR VPFHVAQLGA DGRLTDPSQL
RLSATAANEH NDPNRDPATV LAPGDIEFGG SGSNRWVVLR PKKETAEPSG GSIAPPLRVT
VTVTGPSGKT EQVSFIYEVS RATTPTSRVL LATSDASTAI AVGDGHLLVA DDERAPIRLY
DARVSGRELT TFTPGPTGGE VDFESAARKG DAIYWLGSHG NRKDGGGQAS RHRIYRTRLT
GRGPNARIEP VGTPYQRLRT DLAEWDRTEH DGSLGLYAAG VGKIPPDRLN GFNIEGAEFS
PDGSSLYLGF RSPVVPPESG GRALIVPLEN VEELTAGTAR AAEFGDPILL DLDGQSIREI
RKNAAGEYLI LSATAGLPTA ATEQALWAWD GDPHVAPVRL TTHVARDLEP DHADNAGAWE
GIGEVPARLA PGQQVRLLMD QGYVELYGSG VENKDDSNDW TRKSRTDLVE LTGAVGTLAA
SSATSIAFPA QAAQTTGAPR IVTVTNSGSG KLRIGRVGGT DADGTSFDDF LVSRNECSDE
VLVPGASCKI GLRFSPARQD VTSNATLVVK TNTASGELSV PLSGTSTALP TGPGGDDGSD
GADGADGARG DAGAAGRDGA GGPVGPAGPL GPIGPKGDTG VPGRDGTFSL STTRSTATRV
RRGRTATVSL RVRNGTAAAF DGSTLTASAP KALEAHGRTV KLGRLRAGES RTVRLRLTIG
RTARVGTHVV TVRMRVGRET VTQTVQLRVT R