| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_3204 |
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| Symbol | |
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| ID | 4809506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 3794968 |
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| End bp | 3797370 |
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| Gene Length | 2403 bp |
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| Protein Length | 800 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640108638 |
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| Product | CRISPR-associated helicase Cas3 |
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| Protein accession | YP_001039592 |
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| Protein GI | 125975682 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1203] Predicted helicases |
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| TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3
[TIGR01596] CRISPR-associated endonuclease Cas3-HD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGCTTT CGCACCCGGG AAAGCTGCTT TTGGACCATT TGAAAAATGT GTTTTTAATC
GGAGACTGTA TTTTAATGCA GAAAAAGACC GAATTTGAGA GTTTTTCAGA ACATGATATT
CGCCAATTAA ACAAATTGAA TTTACTTACT CATGATCTTG GCAAGGCTAC ATCGTATTTT
CAGGATTACA TAAGAAATTT GGATGATAAT ACACAAAAGA ATGATGAAAG GAAAAGGCAC
GGTCTTTTGT CAGGGGTTTT GTCCTTTAAA ATTGTAAATG CAGTTATGAA GAATGAAATA
CTTGCTTTTT TATCTTATAT GGTGGTTTCA AAACATCATG GTGAGCTTGA CGATTTTACA
AATTTTATAT CTGTAATAAG CGGTGACGAA AAGAATAAAA CTCTTTTAAA GCTGCAATTT
GAAAGTATAG ATAAAGGTAA GTTGCAGGAA GTCATTACAA GGCTTGGAAT TGATTTTGAC
ATATTGAGTT ATACGGTTGA TGAGTTTGAA AACGACATTG ATTATATTAC TTCGAGAAAG
GTCAGAAAGA AAGTAAAGGA GCTAATGGGA CTTGAAATAT TCCTGCTAAT TGATTATCTT
TTTTCTTTAT TAATCTTTTC TGATAAACTT GAGGCGATAT ACAATAGTGA AAATATGAAT
ATTGAAGAAT TTATTGAAAA AAACACAAAT AGGCCCAGGA TTTCATCGGA TTGTGTTGAT
AAATTCAAAA AAAGCCTTGA AATAAAAAAT ATTCGGATGG CCGAGTGGCG GAACAGGGCA
TATCAGGATG TTTTGGGCAG TGTTGAAAAT CTTTCGCTTG AAGAAAAAAT ATTGTCCATT
AACCTTCCCA CCGGTTCCGG AAAAACACTT ACAGCTCTTA AAGCTGCTTT GCGGTTGAAG
GAAAGACTGA TTGAAGAAAA GGGATATAAT CCAAGAATTA TTTATGTACT TCCCTTTACT
TCGATTATTG AGCAAAATTT TGATGTTTTT CAGAAAGTTT TAGGCACTAC CGAGTCAAAT
GTACTTTTAA AGCATCATTA TTTATCCCAG AGGGTCTACC AATGGGAAAA GGAAGGAGAA
ATAGAGAGCT TAAGTGATAC TGTTTCCGAA CATCTTGTGG AGTCGTGGGA TTCGGAAATA
GTTGTAAGTA CCTTTGTGCA GTTATTGCAT TCTATTTTTA CAAACAGAAA CAGAAAGCTT
AAAAAGTTTC ACAATATTGT TAATTCAATA ATAATATTGG ATGAGGTGCA GAGTATACCC
CACAGGTATT GGAATCTTGT GCGGGAAACT TTTAGTGCCA TGGCAAAGTA TCTTAACTGT
CATTTCATTT TTATGACTGC AACCATGCCA TTGATTTTTT CTGAAGAAAA CAAGGAAATA
TATGAATTGG TAAAGGATAA GAGGAAATAT TTTGAAGAGT TTAGCCGTAT AACCATTGAT
GCGAAAAGAT TGACGGACAA AACTACACTG GATGAATACA AAACATTGTT ATTGGATGAT
ATTCTCCGAT ATAAAAAGGA CGACTTTCTG ATAGTTATGA ATACAATTAG AACTTCCATT
GAGATATATT CATTTATAAA AGAGGAATTA AAGGATGAGG CAGAGATATA TTATCTTTCG
ACCAATATCA TTCCGAAGGA GAGGCTTGAC AGAATAAAAA AGATAAAGGA AAGCAAGAAT
CGCAAGATAA TTGTATCAAC CCAGATGATT GAAGCCGGTG TGGATATTGA TATTGACCGG
GTCTACAGGG ATTTTGGCCC AATGGACAGT ATAAACCAGA CGGCGGGAAG ATGCAACCGT
GAATGGGGAG ATAAAAAGGG ACTTGTTACG CTGGTGAATT TGGTAAATGA AAATCATCAT
AGCAGGCCTT ATGCAACATA TATCTATGAC AATGTATTGA TAGAGGAGAC GAAAAAGGCA
CTTTCAGGGC TTGAAATGAT TGAGGAAAAA GAGATTTTTC ATCTTGCAGA AAAGTATTAT
GTGGGATTGA AAAGCCATGG AAGTGATGAA AGTCAAAAAC TTTTGGATTG CATAAAGGAA
CTTCGTTACA GGGAAGCTTT TGAATGTGGA AAGGATGATA AAAATTCCGG AGTATTTGAA
CTTATACGAC AGGACTTTAA TACGGTGGAC GTGTTTATCG AAATAGATGA TGACGCAACC
GAAGTATGGC AGGAGTATCA GAGTATAAAA AAGATAAAAG ACAGGTTTGA GCGAAAAAGG
AAATTTAATC AGTTCAAAAA AGACTTGTAT ATGTATGTGC TCAGTCTTCC CGAATTTGCT
GTCAGAAAGC AGGTTGATAT TGATGAAAAG GATATAACTT TCATAAACCG GGAAATGGTT
TTTAATACAT ATGATAAAGA TACGGGTTTT ATGAGGGATT TGGAAAAAGA CTACTTTTTT
TAA
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| Protein sequence | MLLSHPGKLL LDHLKNVFLI GDCILMQKKT EFESFSEHDI RQLNKLNLLT HDLGKATSYF
QDYIRNLDDN TQKNDERKRH GLLSGVLSFK IVNAVMKNEI LAFLSYMVVS KHHGELDDFT
NFISVISGDE KNKTLLKLQF ESIDKGKLQE VITRLGIDFD ILSYTVDEFE NDIDYITSRK
VRKKVKELMG LEIFLLIDYL FSLLIFSDKL EAIYNSENMN IEEFIEKNTN RPRISSDCVD
KFKKSLEIKN IRMAEWRNRA YQDVLGSVEN LSLEEKILSI NLPTGSGKTL TALKAALRLK
ERLIEEKGYN PRIIYVLPFT SIIEQNFDVF QKVLGTTESN VLLKHHYLSQ RVYQWEKEGE
IESLSDTVSE HLVESWDSEI VVSTFVQLLH SIFTNRNRKL KKFHNIVNSI IILDEVQSIP
HRYWNLVRET FSAMAKYLNC HFIFMTATMP LIFSEENKEI YELVKDKRKY FEEFSRITID
AKRLTDKTTL DEYKTLLLDD ILRYKKDDFL IVMNTIRTSI EIYSFIKEEL KDEAEIYYLS
TNIIPKERLD RIKKIKESKN RKIIVSTQMI EAGVDIDIDR VYRDFGPMDS INQTAGRCNR
EWGDKKGLVT LVNLVNENHH SRPYATYIYD NVLIEETKKA LSGLEMIEEK EIFHLAEKYY
VGLKSHGSDE SQKLLDCIKE LRYREAFECG KDDKNSGVFE LIRQDFNTVD VFIEIDDDAT
EVWQEYQSIK KIKDRFERKR KFNQFKKDLY MYVLSLPEFA VRKQVDIDEK DITFINREMV
FNTYDKDTGF MRDLEKDYFF
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