| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_3183 |
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| Symbol | trkA |
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| ID | 4809634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 3762304 |
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| End bp | 3763701 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640108617 |
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| Product | potassium transporter peripheral membrane component |
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| Protein accession | YP_001039571 |
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| Protein GI | 125975661 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0569] K+ transport systems, NAD-binding component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00657284 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTA TTGTTGTTGG ATGCGGAAAG ATCGGTTATA CGATAGCAAA GGTATTATCT
GAAAAAAAAG ACATTGATGT AACAGTTGTA GATAATAATC CAAATATTTT TGATAAAATG
GTTGAACCAA TTGATGTAAT ATTTATTTCA GGTAATGGAG CAAATGAAAA GACGCTGATT
GAAGCCGGTG CCAAGGACGC GGATTTAATT GTAAGCACAA CGAATGCTGA CGAATTAAAT
GTATTATGCT GTATTATGGC AGAACGTCTG GGAACAAAAC ATTCTATAGC AAGAGTCCGG
AATCCTGAAT ATATGCTGGA ATTTAATAAG CTTTGGAAAG ACCTTGGTAT TGATATGGTC
ATTAATCCAG AGAGACAAAC GGCAAGAGAG ATTTCAAGGA TTTTGAGATA TCACGCTGCT
GACGATATAG TTACATTTAT AGGTGACAGA GTGGAATTGG TTTCTTTTAA AGTATCTGAA
ACACCGGAAT ATTTCGTTGG CAAGAGCGTA TCTCAGATTT TTGACAATAA CATGGGAATC
CTTCTTGCGA TCGTTGAAAG GGAAAACCAA GCGTTAATTC CAAATGGAGA TTTAATTTTT
AAGGAATCCG ACATTATCTG GATAATGGGT CGCCCGTCTC AAATTATGAA GTTCTTTACC
CTTATAAAGA AAGGGCCTAA AAAAGGGCAG GAAATTATGG TCATAGGTGG AGGAAAAATC
ACCCATTACC TTGTTGAACT TTTAAACAGA CATACGACGA AAGCTAATAT AAAAATCATA
AAAAAAGACC GGAGTAAATG CGAATCGTTG TACGAAGCTT TGTCCTCCGC CTCCCTTGAA
CGGCGCTGTC TGTTCATTCA TGGAGACGGA ACGAATGAAG AACTTCTCAT TGATGAGGGA
ATCGACACAA TGGACGCATG TGTATGCCTG ACGGACAGGG ATGAAGAAAA CGTTTTCATC
TCCCTTTACG CCATGCGCAG GGGAGTAAAG AAGGTTATCA CAAAGATAAA CTATATTCAT
CAGAATATGG CTAAAAGTCT AGGTTTATGG TTGGGAAATA TTATTACGCC TCAATACATA
ACGGCAAAAA CTGTTATCCG TTATGTTGAC GGACTGAGCG GGGCGGTTGG AAGAAATATT
ATGACCATTC ACCAGATTTA TTCCGGTGAT GACGGGAATG TTGACGCAAT TGAATTCCAG
GTGAACAAAA AAGCAAAATG CATTGATACA CCTATAAAAA AATTAAAGCT GAAGAAAGGA
ATTTTGATAG GCTGTATAAG CAGGGATTTT GATATTATTA TTCCATCAGG AGAAACAGAG
ATTCATATTG GTGACAGAGT TATTATTTTT TCAAAAAATA ATGATATTCG TGATCTCGAT
GATATTTTGG AAAACTAG
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| Protein sequence | MKIIVVGCGK IGYTIAKVLS EKKDIDVTVV DNNPNIFDKM VEPIDVIFIS GNGANEKTLI
EAGAKDADLI VSTTNADELN VLCCIMAERL GTKHSIARVR NPEYMLEFNK LWKDLGIDMV
INPERQTARE ISRILRYHAA DDIVTFIGDR VELVSFKVSE TPEYFVGKSV SQIFDNNMGI
LLAIVERENQ ALIPNGDLIF KESDIIWIMG RPSQIMKFFT LIKKGPKKGQ EIMVIGGGKI
THYLVELLNR HTTKANIKII KKDRSKCESL YEALSSASLE RRCLFIHGDG TNEELLIDEG
IDTMDACVCL TDRDEENVFI SLYAMRRGVK KVITKINYIH QNMAKSLGLW LGNIITPQYI
TAKTVIRYVD GLSGAVGRNI MTIHQIYSGD DGNVDAIEFQ VNKKAKCIDT PIKKLKLKKG
ILIGCISRDF DIIIPSGETE IHIGDRVIIF SKNNDIRDLD DILEN
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