| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_3171 |
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| Symbol | |
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| ID | 4809621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 3746814 |
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| End bp | 3749261 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640108604 |
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| Product | S-layer-like domain-containing protein |
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| Protein accession | YP_001039559 |
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| Protein GI | 125975649 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1361] S-layer domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.412777 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAA TTAAGATTGT GAATATTCTG ATACTTTTGG TTCTTTTAAT CAGTTTTAAT
TTGGAGACAG TCAATGTGTT TGCCGGTCCA AATGATATTA TAATTACAAA GGTAGTGCAA
AAAGAGGAGA ATGTTTCAGC CGGTAAAAGT TTTAAACTCG AGGTTTACTA TAAAAATGTG
TTGGGTGTAC CTTTGAAAGA TGTTTATATT TCCGTAGATA AAAGTTCTTC TTTTTATATT
GATAATGATC ATTATCAAAC CGAGTACCTG AAAGACATGG CTGTTGGGGA CGGAGAAGAA
CCTATAATAT TATATCTGGT CTATAAAGGT ACAGGAAACG AATTAACTTT GATATTTGAT
TATTTAAAAG AAGGTGCAAC CGATCGAGAA CAACTTTCAC AAACCCTGTT TCTTAGCGTT
AAAAAAGAAA AAGAACAAAC TTCCGGTGGT TCACAAACCA ACACGGCCGA ATACAAGCCG
AATTTCAGAA TTGTGGGAAA GATAAGCAGC AAACAGGAAG GAAAAAATGT TTCTGTTGAA
TTTCCCATTA AAAATGTGTC CAATTTTACC GCCAAAGACA TTCAAATAAC CATGTCAGCC
GATTCGGCGG ACTCACCTTT TTCGGCGCCG ATGGGGCATC TTTCCGTATC CGTTGACGAG
ATTAAACCCG ATGCCGAAAA AAAGATAAAG CTTGACCTTG CTGTAAAACC GAATACCAAA
AGCGGTATAT ATCCCTTGAA ACTTGAGTTT AAATACGGCA ATTTGTATGG TGATTCATTC
TCTTCATCGG AAGTTATATA TGTTGACATT GAAAACAATG ATAAAAGCCC AAGCCTCATT
TTAAAAGGTG TGGAAATGCT TCCCCAAAAA CCTGCACCGG GGGACAGGTT CAGTGCTTCC
ATAGAACTTG AAAACCTCGG AACTCTTGGA GCAAAAGACG TAAAGGTCAC CTTGAAGGGA
TTAACGGTTG ACGGGATTTA TTCTGAGCTT GTGGGAGTCA ATTATTTGAA AACCATTGAG
GGAGGCAGGA CGGGCAAGCT GAATTTCAGC CTTGTTGCGT CCAATAAAAT AAATGTTCAA
AGTTTTCCGC TTGAAATAGC CGTTGACTAT AAAGACGAAT TTGGCAATTC ATATGCCGAA
AGCTTTATAT ATTATGTGCC CATAAAGCAA AAAAGCGAAG GAAAAGCTTC ATTGAAGATT
GACAACATTA CTTCTCCGGC GACAGTTGTT GCACCGGATG AGGATTTTAA AGTTGGCTTT
GATATTGTGA ATGACGGAAC AAAAGAACTT TCCGACTTAA AGGTGTCGGT AACGGCTGAA
AACGGCATTA TCTGCAAATC ACAAAGCATA ACTGTTGTTG ATTCCTTGAA AGTTGGGGAA
AAGAAAAGCT TTGAGTTTCT TTTCACTGCC TTGACCGATG CAGTCACTAA AAACTACCCT
ATTGCCATAA ATGTGGAATA CGATGATGAA GGTTCTTCGG GAGGAACAAA AGAAAAGCGG
ACTGTTACAC AATATGTTGG AGTTTATGTT GAAAATCCAA AGGAAGAGGA GAAAAAAGAA
AATACTTCCA CTCCGAGGCT TATAATTGAC CGGTACAGTA TATCCACGGG GCAGGCGATA
GCGGGAAAGA GCTTTGAAAT TGAGCTTGGC ATATTGAACA CCCATAAAAA TATGAATGTT
GAAAATATTG CTGTTTCTTT CCTTGCGGAT GAAGGAGTGT TTTTGCCGGC GGCGGAAAGC
GGCAGCACCA TATTCATTGA CCAAATAAAA GCCGGAGAAA GAGTTGTTAA AAAGATGACT
TTTGCGACCA AATATGATGC TGTGCCAAAG AGTTATTTGC TCAATATAAA CTTTGAATAC
GAAGACGAAC AGAACAAGGC ATATACCTTG AAAGAAAGCA TCAGCATACC TGTTATTCAG
GAACAGAGGC TTGAGATAAG TGAAATACAG ACGGGAATGG ATGCAGTTGT GGGACAGCCG
GTTTCTGTAA ATTTGAATTT TTATAACATG GGCAAGTCAA CATTGAACAA TCTTATGGTA
AGGTGCAAGG GAGATTTTGA GCTGCAGCCC AGTTCAGAAT ATTTTGCGGG TAATTTTGAA
CCCGGCAGAA GCGACTATTA TGAAGCATAT ATTGTACCCA ACAAGGAAGG ACAGGTAAAG
GGAAGCATTA TTTTCACATT TGAAGATAAC AACGGCGAGG TTAAAGAGAT TGAGAAAGAG
TTCGAGATTT TTGTCCAGGG TCAGCCTTCA GTAATGAAAG GTGATGTTAC GATAGTGGAG
CCCGGCATGG CGGAAGCGGG AATGAAGTTT GGAAAAGCAG GTTTTCCCGT GCGCAGACTG
TTAATCCTTG CAGGTGTTTC AGTGCCGGTG ATAGCAGGTG TTGTGGTTCT CATAATAATT
CTGGCAAAAA GAAAGAAAGC GAGAGCTGAT TTGTATGAGA ATATCTGA
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| Protein sequence | MSKIKIVNIL ILLVLLISFN LETVNVFAGP NDIIITKVVQ KEENVSAGKS FKLEVYYKNV
LGVPLKDVYI SVDKSSSFYI DNDHYQTEYL KDMAVGDGEE PIILYLVYKG TGNELTLIFD
YLKEGATDRE QLSQTLFLSV KKEKEQTSGG SQTNTAEYKP NFRIVGKISS KQEGKNVSVE
FPIKNVSNFT AKDIQITMSA DSADSPFSAP MGHLSVSVDE IKPDAEKKIK LDLAVKPNTK
SGIYPLKLEF KYGNLYGDSF SSSEVIYVDI ENNDKSPSLI LKGVEMLPQK PAPGDRFSAS
IELENLGTLG AKDVKVTLKG LTVDGIYSEL VGVNYLKTIE GGRTGKLNFS LVASNKINVQ
SFPLEIAVDY KDEFGNSYAE SFIYYVPIKQ KSEGKASLKI DNITSPATVV APDEDFKVGF
DIVNDGTKEL SDLKVSVTAE NGIICKSQSI TVVDSLKVGE KKSFEFLFTA LTDAVTKNYP
IAINVEYDDE GSSGGTKEKR TVTQYVGVYV ENPKEEEKKE NTSTPRLIID RYSISTGQAI
AGKSFEIELG ILNTHKNMNV ENIAVSFLAD EGVFLPAAES GSTIFIDQIK AGERVVKKMT
FATKYDAVPK SYLLNINFEY EDEQNKAYTL KESISIPVIQ EQRLEISEIQ TGMDAVVGQP
VSVNLNFYNM GKSTLNNLMV RCKGDFELQP SSEYFAGNFE PGRSDYYEAY IVPNKEGQVK
GSIIFTFEDN NGEVKEIEKE FEIFVQGQPS VMKGDVTIVE PGMAEAGMKF GKAGFPVRRL
LILAGVSVPV IAGVVVLIII LAKRKKARAD LYENI
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