Gene Cthe_3144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_3144 
Symbol 
ID4809707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp3713395 
End bp3714126 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content40% 
IMG OID640108577 
ProductAraC family transcriptional regulator 
Protein accessionYP_001039532 
Protein GI125975622 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTACC CTGAAGTAAT CAAAACCGCA CTGGAATACA TTGAGCAAAA TCTAAAGACG 
GACATTACAG CTGAAGAACT CACAAAAATG GCAAATTATT CAACCTACCA TTATTACCGC
TTATTTTCGT GGGTTATGGG TTCTTCAATT GCGGAATACA TTTTAAAGTG CCGTCTTGAT
CATGCTCTCG CCGAAATCGC TTGCAGCCGT AAAGCGATTG ACGTGGTACT TGAGTACGGT
TTTGACACCT ATGCAGGATT TTACAAGGCC TTTGTAAAGA TGTATGGTTG CTCTCCGAAA
AAGTATCTTA GCATTTATCA GGAACACAAA CCAGAAAAAA AACCGGAGGT AGTTAACATG
TATACCGAAA AAGAACTTCG AACGATTTTG GAAAACTGGG ATATTGAAAA AAATCTGCCT
GTTAGTGATG TTTATCTTTC GAACGGTTCA AAAGTCTCAG GAAACATCTG GTCAGTAGGA
AGCGATTATT TTCTGAAGAC CGGAAAACGT GAATTACTGC TCAAAAAAAT AAAAATTTCT
AAAGAATTTC ACAGGCAAGG ATTTTCTTCT CTGCCCATAT TAACGAAAAC CGGGGAAGAA
TATGTGGACG GCAAAGATAT CTTTATCCTG ACCCGGGGAT TTGCGGGAAG TCCGCTTCCT
AAGTCCGACA GGTTTGGTGA CAATCGCGTC AAATTTGGTG AGAAGTACGG AAAAGGAATT
GCAAGGCATT AA
 
Protein sequence
MQYPEVIKTA LEYIEQNLKT DITAEELTKM ANYSTYHYYR LFSWVMGSSI AEYILKCRLD 
HALAEIACSR KAIDVVLEYG FDTYAGFYKA FVKMYGCSPK KYLSIYQEHK PEKKPEVVNM
YTEKELRTIL ENWDIEKNLP VSDVYLSNGS KVSGNIWSVG SDYFLKTGKR ELLLKKIKIS
KEFHRQGFSS LPILTKTGEE YVDGKDIFIL TRGFAGSPLP KSDRFGDNRV KFGEKYGKGI
ARH