Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_3144 |
Symbol | |
ID | 4809707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 3713395 |
End bp | 3714126 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640108577 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001039532 |
Protein GI | 125975622 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGTACC CTGAAGTAAT CAAAACCGCA CTGGAATACA TTGAGCAAAA TCTAAAGACG GACATTACAG CTGAAGAACT CACAAAAATG GCAAATTATT CAACCTACCA TTATTACCGC TTATTTTCGT GGGTTATGGG TTCTTCAATT GCGGAATACA TTTTAAAGTG CCGTCTTGAT CATGCTCTCG CCGAAATCGC TTGCAGCCGT AAAGCGATTG ACGTGGTACT TGAGTACGGT TTTGACACCT ATGCAGGATT TTACAAGGCC TTTGTAAAGA TGTATGGTTG CTCTCCGAAA AAGTATCTTA GCATTTATCA GGAACACAAA CCAGAAAAAA AACCGGAGGT AGTTAACATG TATACCGAAA AAGAACTTCG AACGATTTTG GAAAACTGGG ATATTGAAAA AAATCTGCCT GTTAGTGATG TTTATCTTTC GAACGGTTCA AAAGTCTCAG GAAACATCTG GTCAGTAGGA AGCGATTATT TTCTGAAGAC CGGAAAACGT GAATTACTGC TCAAAAAAAT AAAAATTTCT AAAGAATTTC ACAGGCAAGG ATTTTCTTCT CTGCCCATAT TAACGAAAAC CGGGGAAGAA TATGTGGACG GCAAAGATAT CTTTATCCTG ACCCGGGGAT TTGCGGGAAG TCCGCTTCCT AAGTCCGACA GGTTTGGTGA CAATCGCGTC AAATTTGGTG AGAAGTACGG AAAAGGAATT GCAAGGCATT AA
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Protein sequence | MQYPEVIKTA LEYIEQNLKT DITAEELTKM ANYSTYHYYR LFSWVMGSSI AEYILKCRLD HALAEIACSR KAIDVVLEYG FDTYAGFYKA FVKMYGCSPK KYLSIYQEHK PEKKPEVVNM YTEKELRTIL ENWDIEKNLP VSDVYLSNGS KVSGNIWSVG SDYFLKTGKR ELLLKKIKIS KEFHRQGFSS LPILTKTGEE YVDGKDIFIL TRGFAGSPLP KSDRFGDNRV KFGEKYGKGI ARH
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