Gene Cthe_3067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_3067 
Symbol 
ID4809941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand+ 
Start bp3608372 
End bp3609124 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content38% 
IMG OID640108491 
Productmembrane spanning protein 
Protein accessionYP_001039456 
Protein GI125975546 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.688803 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCGT TTAAGGCCGC GTTTATAAAT GAAGTCGAGA AAATATACAG AAAAAAGAAA 
GTCGTTGTGG CAGCCATACT CTCAATCCTT GCCATAGTTA TGGGACAACT GGTGGTTACC 
GGAATAAACA GGGGTTTTGG ATTGATAGCT GCCAGCAGTA CACAGTTTCC GATCCTGGTG 
CTGTCTTTGT TGGTTAACAC CATATTGCCG TTGTTTACAA CACTTGTTGC CATAGATGTA 
TTTTCCGGTG AGTTTTCTCA CAACACCATG AAGATTACAT TAACCAGACC GGTTTCGAGG 
ATGAAACTGT ATGCGGCTAA GATTTGTGCC GTGGCTTTTT TCGTTCTTGC AAATCTGTTG 
ATGATAATGC TGCTGTCTTT AGTGGCGGGA TTTATTTTTA ACGCCGTATC GTTATCGGTA 
TCCGGAGTTT TAAGAATAGT TTTGTCCTAT ATTGTTACTT TGATACCTAT AATGTGCTTT 
GCTCTTATAG TTGTGTTTTT CTCAAATGTT TTAAGAAGCG GAACAGGGGT GTTCTTTTTA 
TCAATTGTTT TATTCATAGC GTTTAATGTG CTTTCGGTCA TTTTTCCAAA GTATTCAAAC 
CTTTTTATTA CATCAATGTT TGACTGGTAT GTTTTGTGGA ATGTTGACAT CATACCGTTG 
GACAAACTTA TACGAGAGTT CCTTATTATG GCAGGATATG CTATAATGTT TTATACCGCA 
GGCTATTATA TGTTTGACAA GAGAGACTTA TAA
 
Protein sequence
MKAFKAAFIN EVEKIYRKKK VVVAAILSIL AIVMGQLVVT GINRGFGLIA ASSTQFPILV 
LSLLVNTILP LFTTLVAIDV FSGEFSHNTM KITLTRPVSR MKLYAAKICA VAFFVLANLL 
MIMLLSLVAG FIFNAVSLSV SGVLRIVLSY IVTLIPIMCF ALIVVFFSNV LRSGTGVFFL 
SIVLFIAFNV LSVIFPKYSN LFITSMFDWY VLWNVDIIPL DKLIREFLIM AGYAIMFYTA 
GYYMFDKRDL