Gene Cthe_2788 details

Gene Information

• Locus tag: Cthe_2788
• ID: 4810105
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium thermocellum ATCC 27405
• Kingdom: Bacteria
• Replicon accession: NC_009012
• Strand: +
• Start bp: 3288861
• End bp: 3289517
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 640108208
• Product: hypothetical protein
• Protein accession: YP_001039180
• Protein GI: 125975270
• COG category: [R] General function prediction only
• COG ID: [COG4887] Uncharacterized metal-binding protein conserved in archaea

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGAAAAA GAGATAAAAG AATGAGCTGC TCTGATTGCG GAGTTCTAAA CTGCTACAGA 
CGCGAAAAAA GTTTTCCGGA CTTTTGTCTG ACTACCAACG TACCGCAAAA AGAGATAGAA 
AAAGTTAACG AGCTTTACAA AAATGACAGC CTGGTTTCAA AAATAGCTCA TACGGCGGCA 
GAAATTGAAG GTACTTATTA TGGGAAGCTT ACAAGAGTGG AAGAGATTAT TGCGTTTGCC 
AAAAGGATAG GTGCAAAAAA AATAGGGATT GCAACCTGCA TAGGCCTTAT GAATGAAGCA 
AAAATTTTTG CCAAGATATT AAAGGCAAAA GGACTTGAAA GCTACAGCGT TATTTGCAAA 
GTTGGGTCAA TAGATAAAAC GGAAATTGGG ATTGCAGAAG AGTTTAAAAT CCAGAAGGGC 
TGCCACGAAG CCTTGTGCAA TCCGATTTTG CAGGCAAGGC TCCTTAACAG GGAAAAAACA 
GACCTCAATG TAATTGTCGG GCTGTGCGTG GGCCACGATT CGTTGTTTAT TAAATACTCC 
AAGGCGCCTG TAACGACCTT GATAACCAAG GACAGAGTGT TGGGACACAA TCCGGCGGCA 
GCTTTGTACA CCAGTGGTTT CTATTATAAA AGACTTTTTG ATGAAAACGA TATTTAA 

 

Protein sequence

MGKRDKRMSC SDCGVLNCYR REKSFPDFCL TTNVPQKEIE KVNELYKNDS LVSKIAHTAA 
EIEGTYYGKL TRVEEIIAFA KRIGAKKIGI ATCIGLMNEA KIFAKILKAK GLESYSVICK 
VGSIDKTEIG IAEEFKIQKG CHEALCNPIL QARLLNREKT DLNVIVGLCV GHDSLFIKYS 
KAPVTTLITK DRVLGHNPAA ALYTSGFYYK RLFDENDI