Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2721 |
Symbol | rplA |
ID | 4810715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 3208955 |
End bp | 3209650 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640108140 |
Product | 50S ribosomal protein L1 |
Protein accession | YP_001039113 |
Protein GI | 125975203 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0081] Ribosomal protein L1 |
TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000127574 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGAG GCAAGAAATA TCAGGAAAGT GTAAAATTGG TTGATAAAAC AAAGCTGTAT GATCCTGTAG AGGCAATGGA ACTTGTGCAA AAGACAGCCA AGGCAAAGTT TGATGAAACT GTGGAGGCAC ATATCAGACT CGGTGTTGAC TCAAGACATG CCGATCAGCA GGTAAGAGGC GCCGTTGTTT TGCCGCACGG TACAGGTAAG AAAGTAAGAG TTCTTGTTTT TGCGAAAGGT GAAAAAGCCA CAGAAGCAGA AAAAGCCGGT GCGGATTATG TTGGTGCAGA GGAATTGGTT TCAAAGATTC AGAATGAAAA CTGGTTTGAG TTTGACGTTG TAGTTGCAAC ACCGGATATG ATGGGTGTTG TAGGTAGACT CGGTAAAGTG CTTGGTCCGA AAGGATTAAT GCCAAACCCA AAAGCCGGTA CCGTAACAAT GGATGTGGCC AAGGCAATTG CCGACATCAA AGCCGGTAAA ATTGAGTACA GGCTGGATAA GACCAACATT ATACACTGCC CTATAGGAAA AGTGTCCTTT GGTACCGAAA AGCTTGTTGA CAATTTCCGC ACATTGATGT CAGCAATAAT CAAGGCTAAA CCTGCAGCAG CAAAAGGCCA GTATCTTAAG AGTGTGGTTG TTACTTCCAC AATGGGACCT GGCATAAAAG TAAATCCTTT AAGAGTAAGT GAATAA
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Protein sequence | MKRGKKYQES VKLVDKTKLY DPVEAMELVQ KTAKAKFDET VEAHIRLGVD SRHADQQVRG AVVLPHGTGK KVRVLVFAKG EKATEAEKAG ADYVGAEELV SKIQNENWFE FDVVVATPDM MGVVGRLGKV LGPKGLMPNP KAGTVTMDVA KAIADIKAGK IEYRLDKTNI IHCPIGKVSF GTEKLVDNFR TLMSAIIKAK PAAAKGQYLK SVVVTSTMGP GIKVNPLRVS E
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