Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2558 |
Symbol | |
ID | 4809165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 3028461 |
End bp | 3029378 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640107973 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_001038952 |
Protein GI | 125975042 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 55 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAAAA CAATCATTAC AGGTGCATCC GGGTTTGTTG GAAAATCATT GGTGAAGGAA CTTTCTGCAA AAGGATATGA AGTTCTCGCC ATTATACGCA ACAAAAATAA AGTATCCGAA TTTGATGATT TAAGCAATGT ATCTGTTGTT GTTTGCGATC TGAGAGATAT AAGCAATCTT AAAAACTTCC TACCGAAAAC CGACTACAGT TATTTCTTTC ACCTCGCATG GGAAGGCACT TCAGGACCTG ACAGAGAAGA CTATCACAAG CAGCTCCAAA ACGTAGTATA TACATGCGAA GCAGTTAAAA CAGCTAAAGA GCTGGGTTGC AAAAGGTTTA TATATGCAGG CAGTTTAATG GAATATGAAA GCATAAAGTA CATTCCCATC AATGGCTCCA TCCCGGTAAA AAACTATATA TACAGAACTG CAAAGCTTAC CGCGCACTAT ATGGCCAAAT CATTGGCAGT AGATTTGGGA ATTGATTTCG TCACCGGTAC TATATCAAAT GCCTATGGTG AAGGTGAAAT ATCTCCCAGA TTAATCAACT CCACCATCAG AAAACTCCTG AAAAATGAAA AAACAAGCTT TACTTCCGGA GAGCAGTTAT ATGATTTTAT ATACATTACC GATGTGGCAA AGGCATTTAT TGCAATTGCG GAGAAAGGCA GAGCCTATGG AAATTACTAT ATAGGAAACA GAACTCAAAG AAAATTGAAA GATTATCTGA TTGATATAAA AAACTGCATT GATAAAAACA TAGAATTGGG ATTCGGAGAA ATTCCTTTTT ACGGAGCAAG TCTCGATTAC ACGGAATTCG ATACAAATGC TTTATATGAA GATACTGATT TTAAATGTGA AGTTGATTTT ATGGAGGGAA TAAAAAAGAC AATAAAATGG ATTGAACAAA ACAGCTAA
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Protein sequence | MTKTIITGAS GFVGKSLVKE LSAKGYEVLA IIRNKNKVSE FDDLSNVSVV VCDLRDISNL KNFLPKTDYS YFFHLAWEGT SGPDREDYHK QLQNVVYTCE AVKTAKELGC KRFIYAGSLM EYESIKYIPI NGSIPVKNYI YRTAKLTAHY MAKSLAVDLG IDFVTGTISN AYGEGEISPR LINSTIRKLL KNEKTSFTSG EQLYDFIYIT DVAKAFIAIA EKGRAYGNYY IGNRTQRKLK DYLIDIKNCI DKNIELGFGE IPFYGASLDY TEFDTNALYE DTDFKCEVDF MEGIKKTIKW IEQNS
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