| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2416 |
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| Symbol | |
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| ID | 4808131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 2884976 |
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| End bp | 2886370 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640107829 |
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| Product | peptidase |
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| Protein accession | YP_001038811 |
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| Protein GI | 125974901 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02889] germination protein YpeB |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000101961 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGTATAA GAGAGAAACT GTTGGATTTT AAAAGAAGAT TGTCGGACAG GAAAATGTAC
AGTATTGTGG TTGTAGCAAT TTCCGCTGTG GCTTTGTGGG GATTCTACCA ATACAAGCAT
GCGGCAGATT TACGACAGGA ACTGGATAAC CAATATAACC GGGCTTTTTA TGAAATGGTT
GGATATGTGA ACAATGTCGA AGTATTGCTG TTGAAATCTC TTATATGCAA CAGTCCGGAA
AAGACGGCCC AGACCATGCA GGAAGCATGG AGACAGTCAA ATCTTGCCCA AAGCAATTTG
GGACAGCTGC CCATAACTCC GGAGGTGCTG TCCAATACAT CGAAATTCCT CACACAGGTG
GGAGATTTGG CTTATTCCAT AAACAATCAG AACATGTCAG GAAAAGGTTT GACTGAGGAG
CAGTATAAAC TTATAGAGCA GCTCCACGGT TTTGCCGTAA CATTGGGGCA AAGCTTGAAT
GACCTTCAGA ATCAGCTTTC GGCAGGAAGA ATAAAATGGG GAGAACTTGC CAATAAAGGA
ACTCCGTTGT TTCAAAAAAC ATCCCAGAAC ATGCAGCTGC AACAGTTTGA GAACATAGAC
AAGACTTTCC AGGATTATCC TACTTTGATT TATGACGGTC CTTTTTCGGA CCACATGACT
ATGACCGAGC CTAAAGGACT TACGGGAAAT GAGATGAATC CGGAAGAAGC AAAACAGAGG
GTTGTGGATT TCTTCGGCAA AGATAAAGTG AGTGCGGTGG AGGATATCGG AAGAAACGAC
GCGACAACTA TAAAGACCTA TAGCTACAGG GTTAAGTTTA ACAATGTACC TGAGGAACAG
ACCGCAACCG TGGATGTGAC TCAAAAGGGT GGTCATGTTT TATGGATGCT TTACAACAGA
CCCATTGGAG CGGAAGAAAA CATAAACATT GACCAGGCAA AGGAATTGGG AAAGAAGTTT
TTAGAAGAGC ATGGATATAA AAACATGGTT GACACCTATT ATCTGAAAGA GGACAATACG
GCGATTATCA ATTATGCTTA CAAACAAGGG GATGTTGTTG TATATCCCGA CCTTATAAAA
GTAAAAATCG CACTGGATAA CGGTGAAGTA ATAGGCTTTG AGAGCAAGGG TTATCTTTCC
AATCACACGG AAAGAAATAT TCCGGCTCCA AAACTTACTT TGGAGGAGGC CCGTTCCAAA
ATTTCATCGA GGATGCAGGT TTTAAGCTCA GGCCTTGCTA TAATACCCAC GGACTACAAG
ACGGAATTGT TCACTTATGA GTTTAAGGGG AAACTTAATG ATAAGGATTT TCTTGTCTAC
ATCAACGCCG AAACCGGTAA AGAGGAGAAT ATCCTTATGA TAATTGACAC GCCGAACGGA
GTACTGACAA TGTAA
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| Protein sequence | MSIREKLLDF KRRLSDRKMY SIVVVAISAV ALWGFYQYKH AADLRQELDN QYNRAFYEMV
GYVNNVEVLL LKSLICNSPE KTAQTMQEAW RQSNLAQSNL GQLPITPEVL SNTSKFLTQV
GDLAYSINNQ NMSGKGLTEE QYKLIEQLHG FAVTLGQSLN DLQNQLSAGR IKWGELANKG
TPLFQKTSQN MQLQQFENID KTFQDYPTLI YDGPFSDHMT MTEPKGLTGN EMNPEEAKQR
VVDFFGKDKV SAVEDIGRND ATTIKTYSYR VKFNNVPEEQ TATVDVTQKG GHVLWMLYNR
PIGAEENINI DQAKELGKKF LEEHGYKNMV DTYYLKEDNT AIINYAYKQG DVVVYPDLIK
VKIALDNGEV IGFESKGYLS NHTERNIPAP KLTLEEARSK ISSRMQVLSS GLAIIPTDYK
TELFTYEFKG KLNDKDFLVY INAETGKEEN ILMIIDTPNG VLTM
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